Phalacrocorax aristotelis (European shag): 142062126
Help
Entry
142062126 CDS
T11493
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04137
Mitophagy - animal
parx04140
Autophagy - animal
parx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142062126 (HIF1A)
04137 Mitophagy - animal
142062126 (HIF1A)
04148 Efferocytosis
142062126 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
parx03000
]
142062126 (HIF1A)
Transcription factors [BR:
parx03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
142062126 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
142062126
NCBI-ProteinID:
XP_074960251
LinkDB
All DBs
Position
9:complement(31238745..31273589)
Genome browser
AA seq
811 aa
AA seq
DB search
MESPGGVTDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM
RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM
LKPVESPDTKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE
QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNT
EPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAI
DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSGSQNAATVTIFQQT
QTPSSTADEIKPVTERVDDVKTLMVPSSPVHIISETSSAPASPYSGNRSRTASPIRAGKG
TLDQTEKSCPGVPSLLTVTLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIG
SLFQQTGDRGGNASLAWKRVKGCKTNGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQL
TSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggagagccccggcggcgtcaccgacaagaagaggattagctcggaacgcagaaaggag
aagtcaagagatgcagcccggtgccgaaggagcaaggaatcagaagtgttctatgagctt
gctcatcagctgcccctgccgcacactgtgagcgcacacctggacaaggcatccattatg
agactgaccatcagctacttgcgcatgagaaaactgctagatgctggtgagctggagaca
gaagccaaaatggagaaggaactgaactgcttctacttaaaagctctcgatggatttgtc
atggttctgtccgaagatggggacatgatttacatgtctgaaaacgtgaacaagtgtatg
ggactcactcagtttgagttgacggggcacagtgtatttgacttcactcatccatgtgac
catgaagagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag
caaaacacggagcgcagcttttttctcagaatgaagtgtactctgactagcaggggaaga
acagtgaatataaagtctgctacgtggaaggtactgcactgcactggacacatccgtgta
tacgacacatgcggtaatcaaacacactgtggctacaaaaagcctcccatgacgtgtctg
gtgttgatctgtgaacctattcctcatccatcaaacattgaggtccccttggacagtaaa
acgttcctcagtcgtcacagtcttgatatgaaattttcctattgtgatgaaagaattaca
gagttgatggggtatgagcccgaggaactcctgggtcgctcgatctatgaatactatcat
gcgctggattctgatcacctgaccaaaacacaccacgacatgttcacaaaagggcaggtg
acaacaggacagtacagaatgcttgctaaacaaggtggctatgtctgggttgaaactcaa
gcaactgttatatacaacactaagaattctcagccgcagtgcatagtgtgcgtaaactat
gtgttgagtggaattgtccagaaggatttgattttttcccttggacaaactgagtgtatg
ctgaaaccagtggagtctcctgatacgaaaatgaccaaaatattcagcaaagatgacctg
gatgacaccaacagcctttttgaaaaacttaaacaagaaccagatgctttaactgtgctg
gccccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaa
caacaatgtgatgaagttcctttgtataatgatgtaatgctcccctcatccagtgagaaa
ttgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccactt
cgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaacaca
gagccactcgaactttcttttaccatgcctcaggtgcaagagcaaccaaccagcccttct
gatgcaagtaccagccaaagttcacctgagcccagtagtcccaacgactactgctttgat
gtggataacgatatggctaatgaattcaaactggaactcgtggagaaactctttgcaata
gatacagaggcaaaaaatccgttctctactcaggaaactgatttagatttggagatgttg
gctccttacatcccaatggatgatgacttccagttgcgttcctttgatcagctatctcca
ctggaaagcagttcatccggctctcaaaatgcagccaccgttaccatatttcagcagact
cagacaccatcaagtactgctgatgaaataaaaccagtaacagaacgtgtggatgacgtg
aagacgctaatggttccttcatctccggtccacataatcagtgaaacgagtagtgcccca
gcgtcaccttacagtggcaacaggagtcgaactgcatctccgatcagagcaggaaaagga
acattggatcagacggaaaaatcttgtccaggagtgcccagcttgctaacagtcactctg
aataaaagatctactgcaatggatgaagaactaaatccaaagatgctagctttgcataat
gctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattggg
tctttattccagcagacaggtgaccgtggaggaaatgcatcacttgcttggaaacgtgta
aagggatgcaaaacaaatggtcataatggagtggagcaaaagacaatcattctactatca
actgacatagcaagtaaacttctagggcagtcgatggatgaaagtggactgccccaactc
acaagttacgattgcgaagtaaatgctcccatacaaggcaacagaaacctgctacagggt
gaagaactgctcagagctctggatcaagttaactga
DBGET
integrated database retrieval system
