Phalacrocorax aristotelis (European shag): 142062216
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Entry
142062216 CDS
T11493
Symbol
ATL1
Name
(RefSeq) atlastin-1 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142062216 (ATL1)
Membrane trafficking [BR:
parx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
142062216 (ATL1)
Autophagy
ER-phagy
ER-phagy recepters
142062216 (ATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
142062216
NCBI-ProteinID:
XP_074960475
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All DBs
Position
9:complement(35541637..35573296)
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AA seq
558 aa
AA seq
DB search
MARNRRERSSWGSFAEKTYEWSSEEEESVRKAGPVQVLIVKDDHSFELDEAALNRILLSE
AVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNKEAVDWVGDYNEPLTGFSWRGGSERET
TGIQIWSEVFLVDKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQ
NVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGSDGGARFLEKRL
KVSGNQHEELQNVRKHIHSCFTKISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKIL
IPWLLSPESLDVKEINGNHITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAV
ATAKDTYSRRMEEVCGGDKPFLAPSDLQTKHMELKEEAVKLFRGVKKMGGEEFSRRYLQQ
LENEIDELYIQYIKHNDSKNIFHAARTPATLFVVIFITYVIAGVTGFIGLDIIASLCNMI
MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGSTNEALYKLYSAAATHRHLYHH
AFPAQKAEPAEGSERKTV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcccggaaccgccgggagaggagcagctggggtagttttgcagagaagacttacgag
tggagctcggaggaggaggagtccgtgaggaaggcaggaccagtgcaagtcctcattgtc
aaagatgaccactcctttgaactggatgaagcggcactgaaccgcatccttctctcagag
gctgtcagagataaagaggttgtggctgtgtccgttgctggagcttttaggaaaggaaaa
tcattcctgatggacttcatgctgcggtacatgtacaataaggaggcagtggactgggtt
ggagattacaatgagcctctgactggtttctcctggaggggagggtctgagcgggagaca
actggcattcagatatggagcgaggttttcctggtggacaagcctgatggtaaaaaggtt
gcagtgttgctgatggacacgcaggggacctttgacagccagtccaccctgcgggattca
gccaccgtgtttgcccttagcacaatgatcagctcgatacaggtttataacttgtcccag
aatgtgcaggaggatgatctgcagcacttgcagcttttcactgagtatggtcgcctggcc
atggaggagacgttcttgaaacctttccagtcccttatattccttgttcgtgactggagc
ttcccctatgaattttcctacggatctgatggtggtgcaagatttttggagaagcggctg
aaggtctcgggaaatcagcatgaagagctgcagaatgtcagaaagcacatccattcctgc
ttcaccaaaatctcctgcttcctcttacctcacccgggcctgaaagtcgccaccaaccct
aatttcgatggaaaactgaaagaaatagacgatgagttcatcaagaacttgaagattttg
attccttggcttcttagtcccgagagcctggatgttaaggagatcaatggaaaccatatc
acctgtcgaggccttgtggagtattttaaggcatacataaagatctaccaaggggaagaa
ttgccacacccaaagtcaatgctgcaggccacagcagaagccaacaatttagcagcagtt
gccactgccaaagacacctacagcaggagaatggaagaggtctgtggtggggacaaaccc
ttccttgcacctagtgacctccagaccaaacacatggagctgaaggaggaggctgtgaag
ctgttccgcggggtgaagaagatgggtggggaggagttcagccgtcgctacctccagcag
ctggagaacgagatagatgagctctacatccagtacatcaagcacaacgacagcaagaac
atcttccacgctgcccgcacccccgccacgctcttcgtggtcatcttcatcacttacgtg
atagctggagtgaccggcttcattggcttggacatcatagccagtctgtgcaacatgatc
atgggcttgacacttatcacactgtgtacctgggcatatatcagatactctggggagtac
agagaactgggcgcagtaatagaccaagtggctgcagcgttatgggaccagggaagcacg
aatgaggctttgtacaaactgtacagcgcggcggcgacgcacagacatttgtaccaccac
gccttccccgcacagaaagcggagcccgccgagggctcggagaggaagaccgtgtaa
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