Phalacrocorax aristotelis (European shag): 142062372
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Entry
142062372 CDS
T11493
Symbol
TBL3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142062372 (TBL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
parx03009
]
142062372 (TBL3)
Ribosome biogenesis [BR:
parx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
142062372 (TBL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_Gbeta
Utp13
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Mcl1_mid
Motif
Other DBs
NCBI-GeneID:
142062372
NCBI-ProteinID:
XP_074960752
LinkDB
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Position
10:complement(1925287..1936991)
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AA seq
806 aa
AA seq
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MEAAAASPVRFKSNYAVSRKIEPFYKGGRVQVNRDGKFMFCPCGTKLNVIDVETGALRSL
QQDDEEDITSFVLSPDDEILVTGSRALLLKQWDWRESKCVRTWKAVHVAPVASMAFDSTS
TLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDPSRLQLFSSSIDYKIRIWD
LNSSKCVAVLDGHFSAVTSLAFAGGNTLISSGRDKICMVWDLKTRESKRTVPVYESVETA
VLLPEKGDFSQLGVKKQGLHFVTAGSKGILKVWEVATAACVYTQPVPFESKEEASEHSLT
QCMLVPERNEIVTVSVEHNIVLYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNS
PQLKVFELATLHCQILYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQ
GLGHAHGVGAVSCSRLKESFVVTSSQDCTIKIWNIPESLTSKAKAALISSPETLHAKVTE
RGHNKDINSVAVSPNDKLIATGSQDRLAKLWSCSDCSLLGVFTGHKRGIWCVQFSPVDQI
LATSSADGTLKLWGLRDFSCLKTFEGHDASVLKIIFVSRGTQLLSSGSDGLLKLWTIKTN
ECVKTLDGHEDKIWGLHSNKQDDMVVTASSDSCIMLWKDVTEIEEKEAQAKQEEQIMKEQ
ELSNLLHEKRYLKALGLAISLDRPHTALMVVKAILKEADGRKHLEENIVRLRKDQKEAVL
TFLVTWNTNSRNCHEAQAVIETLLKHEAPDNLLQYSGIKSAVESLLPYTERHFQRLSRLL
QASMFIDFMWQNMRLADAAQQEDMTL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccgccgccagccccgtgcggttcaagagcaactacgccgtgtcgaggaag
atcgaacccttctacaaaggggggcgagtgcaggtaaaccgggatggaaagttcatgttt
tgcccctgcgggaccaagctgaacgtcatcgatgtggaaacaggagctctgcgcagcctc
cagcaggacgatgaagaggatatcacttcatttgttcttagccccgatgatgagatcctc
gtgacagggagccgagccctgttgctgaagcaatgggactggcgggagagcaagtgcgtt
cgcacatggaaagccgtgcacgtcgccccagtggctagcatggcctttgactctacttca
acgctgttagccacaggtggctgcgacagcaccattaagatctgggatatgatcaaacag
tactgcacacacaacctaaaaggatcttcaggagttgtacaccttgttgagttccaccct
gatccctcccgcctgcaactcttctcctcctccatcgactacaaaatccgcatctgggac
ctgaattccagcaagtgtgttgctgtgttggacggccatttcagtgccgtcacctcgctg
gcctttgcaggtggaaacacgctcattagttctggccgtgataaaatctgcatggtgtgg
gacctgaaaaccagagaaagtaaacgaaccgtccctgtctatgagagcgtggaaactgct
gtcttgttacctgaaaagggcgatttctcacagctgggtgtgaagaaacaagggttgcac
tttgtcacagctggcagcaaaggcatcctgaaagtttgggaagttgccacagctgcttgt
gtgtatacccagcctgtgccctttgagtcgaaggaggaggccagcgagcacagtctcacc
cagtgcatgcttgtgcctgagaggaacgagattgtcacggtgtccgtggaacacaacatt
gttttatatgacgctcaaactctccagctcaggaagcagcttgcaggttacaacgatgag
gttctggatgtgaagttccttgggcctggtgattctcacattgtcgtggctaccaacagc
cctcagctgaaagtgtttgaactggcaacgttgcactgccagatcctctacggccacaca
gaaacaattcttgctttggatgtcttcagaaaaggcctgatgttcgtcagctgtgctaag
gacaaaagcattcgagtctggcggatgaacaaagatggaagggtggtctgtgttgcccaa
ggactgggtcatgcgcatggggtaggcgctgtctcttgctcaagactcaaagaaagcttc
gtagtgaccagcagccaggactgcacaatcaagatctggaatatcccagaatccctcact
tccaaagcaaaagctgccttgatctccagtccagaaacccttcatgcaaaagtgactgag
aggggtcataacaaggacataaacagcgtggcagtttctccgaatgacaagctcattgcc
acagggtcgcaggatcggctggccaagctgtggtcctgttctgactgctctttgctgggt
gtcttcaccggacataagcgcgggatctggtgtgtgcagttctcccccgtggatcagatc
ttggccacctcttcagcagatgggaccctgaagctttgggggcttcgggacttcagctgt
ctgaagacctttgaaggtcatgatgcctctgttctgaagatcatttttgtaagccgagga
acgcaactgctcagcagcggttctgacggtctcttaaaactctggacaattaaaacaaat
gagtgtgtgaaaacgttagatggtcatgaagataaaatctggggtcttcactctaacaag
caagacgatatggttgtgacagcgtccagtgactcctgcatcatgctgtggaaggatgtc
actgaaattgaagagaaagaagctcaagctaagcaggaggagcagataatgaaagagcaa
gagctttctaacctgcttcacgagaaaagatacctcaaagctttagggttggcaatctct
ctggatcgtccacacacagcgttgatggtggtcaaagccatcctcaaggaagctgacggg
aggaagcacttggaagagaacattgttcggctccggaaggatcagaaagaggcggtgtta
acgttcctggtgacgtggaacacgaactctcgaaactgccacgaggcccaagctgtcatt
gaaaccctcctgaagcacgaagcaccggacaacctcctgcagtactcgggcattaaatct
gccgtggagtccctgctgccttacacggagcgccactttcagagactgagccgattgctg
caggcctccatgttcattgatttcatgtggcaaaacatgaggctggcggacgcagcccag
caggaggacatgacattgtga
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