Phalacrocorax aristotelis (European shag): 142062412
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Entry
142062412 CDS
T11493
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx00260
Glycine, serine and threonine metabolism
parx00630
Glyoxylate and dicarboxylate metabolism
parx00670
One carbon pool by folate
parx01100
Metabolic pathways
parx01200
Carbon metabolism
parx01230
Biosynthesis of amino acids
parx01240
Biosynthesis of cofactors
parx04981
Folate transport and metabolism
Module
parx_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
142062412 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
142062412 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
142062412 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
142062412 (SHMT1)
Enzymes [BR:
parx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
142062412 (SHMT1)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
142062412
NCBI-ProteinID:
XP_074960831
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Position
10:3322618..3329008
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AA seq
485 aa
AA seq
DB search
MANSTQGNGGLPSMELWASHNRMVLEPLESNDPEVHSIIKKEKQRQRLGLELIASENFAS
RAVLEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYQLDPQKWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKT
GYIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADANGAYLMADMAHISGLVAA
GVVPSPFDHCDIVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFP
GLQGGPHNHAIAGIAVALWQAMTPEFKAYQQQVVANCKALSAALMELGYDIVTGGSDNHL
ILLDLRSRGTDGGRAERVLEICSIACNKNTCPGDISALRPSGLRFGTPALTSRGFRQDDF
RMVAQYIHRGIELTLRVQKDMSPKATLKEFKEKLEDEKYHGDLKALKEEVEAFAATFPLP
GLPVL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgacacagggcaatgggggcctccccagcatggagctctgggcctcccat
aacagaatggtgctggagccgctcgagagcaacgacccggaggtgcacagtatcatcaag
aaggagaagcagcggcagaggctggggctggagttaattgcatcggagaactttgcgagc
cgagcagtcctggaggccctggggtcctgcatgaacaacaaatactctgagggctaccca
ggacagaggtactatggtgggacagagtttgtagacgagctggaaaggctgtgccagaag
cgagccctgcaggcataccagctcgacccccagaagtggggcgtcaacgtccagccctac
tcaggatcacccgcaaactttgcggtgtacacggcactggtggagccccacgggaggatc
atggggctggacctgcctgatgggggccacctcacccatgggttcatgacagacaagaag
aagatctctgccacctctgtcttcttcgagtccatgccctacaaggtcaaccccaagact
ggttacattgattacgaccggctggaggaaaacgcccgcctcttccaccccaaactgatc
atagcaggtgtcagctgctactcgcgcaacctggactatgcccgcatgcggaagatcgcc
gacgccaacggtgcctatctcatggccgacatggcccacatcagcgggctggtggctgct
ggcgtggtgccctctccctttgaccactgcgacattgtctccaccaccacccacaagacc
ttgcggggctgcagggccggcatgatcttctaccgcaaaggcacccgcagtgtggacccc
aagacgggcaaggaaacactctacaacctggagagcctcatcaaccaggcagtcttcccc
gggctgcagggaggcccgcacaaccacgccattgcagggatcgccgtggcactgtggcag
gccatgacgcccgagttcaaggcctaccagcagcaggtggttgcgaactgcaaggcactc
tcagcggcgctgatggagctgggctacgacattgtcacagggggctccgacaaccacctg
atcctgctggacctgcgcagcagaggcacggatggcggccgggctgagcgggtgctggag
atctgttccatcgcctgcaacaagaacacatgccccggtgacatcagcgccctgcgcccc
agcggcctgcggtttgggacgccggctctcacttcccgcggcttccggcaggatgacttc
cgcatggtggctcagtacatccacagagggattgagctgacgctgcgtgtgcagaaggac
atgagcccaaaggctacgctgaaggaattcaaggagaaactggaggatgagaaataccat
ggggacctgaaggcactgaaggaagaggtggaggcctttgcagcgaccttcccgctcccg
gggctgcctgtcctgtaa
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