Phalacrocorax aristotelis (European shag): 142062532
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Entry
142062532 CDS
T11493
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
parx01002
]
142062532 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
parx04121
]
142062532 (USP42)
Enzymes [BR:
parx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
142062532 (USP42)
Peptidases and inhibitors [BR:
parx01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
142062532 (USP42)
Ubiquitin system [BR:
parx04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
142062532 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
142062532
NCBI-ProteinID:
XP_074961135
LinkDB
All DBs
Position
10:8662173..8682621
Genome browser
AA seq
1337 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSKKPRTKKMTSRTANLGRVPPAEDPNKVSVDKGPGGAI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTQSCHEEGFCMMCTMETHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDITLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVDLSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAGFMGPRLPPHMIKNSSRLNGNGPLKEDPNTVGVTLKRPSS
APPTACVQNWAITRPSITDPSKNQKITISIHNKLPARQTVSQPDCLSSAAEDEELSKPVP
SSTITNSSAAESTSNASTMSVATNISKQEVPDEIFVEPAVNGNPKLSSDNAVSYSAESSG
KSEESKGLFKRNCNIVSSNGILIGKVVHTLQNPHSSCQNAEEERSQHELPKNDSLNGAIS
LDNESKENGLKLDDSACQVQPVKPSEIFFSKTNGLLETMPIALSPVPQEIILESLTYSQL
NSLSEEISVPGPQKSSENDGLMETVVMEALFAYEESRKVPSNFSCEVESLFTQSDSETIS
TKEVAESIITKVDHVHPNINGQHKVRKKSLDTEDGFLGQCESEDSRDKEKPRSKEPELIS
KENPLYIKGAPDSEEKLGQTSAMKSDTECSSKNLASLDIADKCQDTKDISKNYVEVPPVN
DSSIMKLDKVLESQFSRENEGLSNKKCEEDKHRKKYKKKIYDSKKTDKEHYRRKRENSDT
EEREKEKQTRSKTDDHSHKRRCSRSMETAKQNRHKQEYCSESKYRSSHSERNSPNNGKSS
GKYSRYRSRSRERTEDRNRYYHSKGDRTWSRERYYQDEPRRWEKCRYYNDYYSSHGMRDG
RERKSSHCDKDFDKSSQAYNNRSHKDYHCKSRWPHNTLFREEDVHHFSSHRANLHHCSVP
QQQSEKYSRERHALPPLSAHANFEDSSRENEKDKLRNGKRKYSHTEGSGSETEKKCRKIG
DQRMKKYKKVKKKKKSKDKHREKDYKLYDLDFSVLRFDNDNRKRKKKKKKKKHIRKLKGF
LEYLEPHFQKKTREKKEESCPPGGYLCEQYRNQGSKQPYKEGKPSSAGESKKKYSSITSN
EYVKDAELTDGSLQCSS
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaaatcaaaaaaatcgtcatcaaggcggtct
gacaaatctaagaaaccccgtactaaaaaaatgacgtcacgcaccgcaaatctgggccgg
gtaccacctgcggaagatccaaacaaagtctctgtggacaaaggacctggaggtgctatt
tattgtagatcatctcaaaaatctaagccttttgcccaaagagatctagttgttaatgat
ggaattgccccgccacaaagaattcttttcccacctgagaaaatttgtatggattggcaa
caaacacaaagtgttggagttggactgcagaatcttggcaatacatgtttccttaattct
actctacaatgtttgacctacacacctcctcttgctaattacatgctttctcttgaacac
acccagtcatgtcatgaagaaggcttctgtatgatgtgcacaatggaaactcacattaac
caggtcctgtgttgctctaataatgccatcaaacctacatctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttgcagaaagcttgcttaaatggaagcaccaaattggacagatcttcg
caagccaccacacttatatatcaaatatttggaggatatctgagatcccgagtaaagtgc
ttgaactgcaaagcagtttcggatacgtacgagccattcctcgatattactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacaactggac
ggtgaaaatagctataaatgtagcaagtgtaaaaagatggttcctgcgtcaaagaggtac
acgatacatcgttcttccaatgttctcacaatatcactgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaatatcctgaatatttggatcttcgagcatatatg
tcccaatcaattggagaaccgctcatctatgctttatatgcagttcttgtacatagtggt
ttcaactgtaacgcaggacactatctctgcttcataaaggctggtaatggactttggtat
cgaatgaacgatgcctcagtagacctttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctatgatttgacactcggagaacgtgctttttactta
ccagcaccatcttatccccgttcattccttggtcagcggggggctaatagtaaacaggct
ggatttatgggaccacgacttcctcctcatatgataaagaattcaagtcgtttaaatgga
aatggacccctaaaagaggatccaaatactgttggcgtcaccctaaaaaggccatcttca
gctccaccaacagcttgtgttcaaaactgggcaattaccaggccttcaattactgatcca
tcaaaaaaccagaagatcactatcagtattcataacaaattgcctgcacgtcagacagtg
tcgcaacctgactgtcttagcagtgctgcggaggatgaggagctaagcaagcctgttcct
tcatccacaattacaaattcttctgcagcagagtctacctcaaatgcatctaccatgtca
gttgctactaacatttccaaacaggaagttcctgatgaaatttttgtggagccagcagtg
aatggaaatcctaaactcagctctgataacgcagtctcttacagtgcagaatcttcagga
aaatctgaggagtcgaagggcttgtttaaaaggaattgcaacatagtatcttctaatgga
attttgattggaaaggtggtccatacattgcagaatccccattcttcctgtcagaatgct
gaagaagaaagatcccagcatgagctgccaaaaaatgattcgctaaatggtgctattagt
ttagataatgaatctaaagaaaatggactgaaacttgatgattccgcttgccaagtccaa
cctgttaaaccttctgagattttcttttctaaaacaaatggattgcttgaaacaatgcct
atagctttgtcgccggttcctcaagaaataatcttagaatctctcacatacagccagctc
aacagcttgtcagaggaaataagtgtccctggacctcagaaatcttctgagaatgatggt
cttatggaaactgtagtgatggaagcactgtttgcttatgaagaatccaggaaggttcct
tccaattttagctgtgaggttgagagtctttttactcaatcagattctgaaaccatttct
accaaagaagttgctgaaagtattataacaaaagttgatcatgtgcatcccaatatcaat
ggtcagcacaaggtcaggaaaaaatccttggacactgaagatgggttccttgggcagtgt
gagtctgaggatagtagagacaaagaaaaaccaagatcaaaagaacctgaactaatttca
aaagaaaatcctttgtacatcaaaggggctcctgacagcgaagagaaattggggcaaact
tctgctatgaagtctgacactgaatgtagttctaaaaatcttgcatctctagatattgca
gataaatgccaagatacaaaggacatttctaaaaactatgtagaggtcccacctgttaat
gactcttccattatgaagctggataaagtcttggagagtcagttttctagagaaaatgag
ggactgagtaataaaaaatgtgaagaagataaacataggaaaaaatataagaaaaaaata
tacgactctaaaaaaactgacaaagagcactaccgaaggaagagagaaaactcagacact
gaagagagggagaaggagaagcaaaccagaagcaaaacagatgatcattcccacaagagg
aggtgctctcgcagcatggaaacagctaagcaaaatcgtcataagcaggaatattgcagc
gaaagcaagtacagatcttcccatagtgaaagaaacagtccaaataatggcaaaagctca
ggaaaatattctcgttacagatcccgaagcagagaaagaacagaagacaggaataggtat
tatcattccaaaggagacagaacctggagcagagaaagatactatcaagatgaaccacgg
agatgggaaaaatgcagatactacaatgattattattcctctcatggaatgagagatggt
agagagagaaagtcctctcattgtgacaaagactttgacaaatcaagtcaagcttacaac
aacagatcacataaggattaccactgcaaaagcagatggcctcacaacacactgtttaga
gaggaagatgtacatcatttcagcagccacagagcaaatttacatcattgttcggtacct
cagcagcaatctgaaaagtattctcgtgaaaggcatgcacttccacctctatcagctcat
gcaaattttgaggactcttcccgagaaaatgaaaaagacaaactaagaaatggcaaaaga
aaatatagccacacggaaggaagcggaagcgaaacagaaaagaaatgccgaaagataggt
gaccaaagaatgaaaaaatacaagaaggtcaagaagaaaaagaagtccaaagataaacat
cgagagaaggattacaaactttatgatttggatttctctgtgctccgctttgacaatgac
aatcgcaaacgtaagaaaaagaagaaaaagaagaaacacatcaggaaactgaaaggcttc
ttggaatatttagagcctcatttccagaagaaaacacgggagaagaaggaagaatcctgt
cctccaggtggctatttatgtgagcaatacagaaaccagggcagtaaacaaccctacaag
gaagggaaaccttccagtgcaggtgaaagcaagaagaaatatagctccatcacatccaat
gagtatgttaaagatgcggagcttactgatggaagccttcaatgctcaagctaa
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integrated database retrieval system
