Phalacrocorax aristotelis (European shag): 142063081
Help
Entry
142063081 CDS
T11493
Symbol
SHROOM4
Name
(RefSeq) LOW QUALITY PROTEIN: protein Shroom4
KO
K18625
protein Shroom
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
parx04812
]
142063081 (SHROOM4)
Cytoskeleton proteins [BR:
parx04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
142063081 (SHROOM4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASD2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
142063081
NCBI-ProteinID:
XP_074962554
LinkDB
All DBs
Position
11:complement(24699912..24712477)
Genome browser
AA seq
1406 aa
AA seq
DB search
MERAEGRPGAPPQYVHVQLQGGAPWGFTLRGGLEHGEPLIVSKVEDGGKAALSCQLQPGD
ELVNISGTPLYGSRQEALILIKGSYRTLKMIVRRRSVPVLRPHSWHVAKLTESRPDAPAM
HCPTDAFSLSWPSGCDVSELSMQWNPLSRHCSTDRSSSIGSMESLDQPGQAYYEGDPSPV
DQGVYHSKRDSAYSSFSASSIASDCALSLRPEEAASVDSGLQGPCKVPDGRYLTTGAEPP
ASRHSEAWRAPVPPQPPVRRDSLRAAPAGGGDRRRASVSVDMLHAKGRWISDTFLCQRDR
EVEAAGGRTPAPYSTKDRLSAEQYYMLSSHPDECPAEPLLGNSAEPGDRLYLDGGVHRVP
DAAVAGDNLLLSPLKGHAPHRHSAPEQLLASQLCSLQVGTGSGRASPAPDGHRWTLSPLH
PEGSRPGATGAVQDTPLCPEPCRRLPSCRCCPEPQRACGQDGRGASPVCGTEGPAEEESR
PGGRRAGGPPHRSAQMRRRSDRFATSLRNEIQRRKAQLQKSRGPGAPPPGEEPVEEADES
PEGNMLAEGPHAPAEHLSPMLSEDGRNPGHLGAQGIPTPDPLPVPKGPASPERVVPMGRG
RWRWSPERKLQRQCSPNPGELEGYGQGPMAPSSPPRGSDEAVLLPFADRRRFFEESSRPA
PPRQGKPPAGDPGTFQPPGPERRDARHLSVDQPYGSPSPGHPGSASPYTERCREQPPCYK
PLGRPVELEYMRGFSYPCGGPLRPEPCHYCGGDLCPPPLPRGHACRCHPKPWARCPDCCC
PAPHPGRDESDAWPPRRAFTPEFPLDEWEPPAITRKAGQSISELSRYQMGFPRLGPFRPC
FESAEPDWPPCYRATSTHDLSWDGDCLAHSPESPPDPLHRPLRGRAFSESHLNLEPASPR
GRDRKDILRAKLDPPGIPKKKGPPPPRPPPPNWEKYRQRRMSQHLPGGSGHSSAFTAAPV
PSRSIAEAVRERSQSLTGEHGGRSRVHAAHPPAPLGSWPRPEPPGSLCRTPEPDAGSTEI
CRTAGTRQEWPKAKHPWEMVEQPQRLGRNQERGWAGLRGVSECSLPLRGGSGPTTREATK
PSVRAAEEASCQGGRPQPHPRMDSEELLWDVVGRDRSMASILAPSAPLVTATEVVGELLV
AGERQAWRERFQQDWRLEALAQDRQGFEPISPPPGSTTSSTAYPAYYGVAAGTAEPLGKV
KELPEVVEGSSEDEEEEVDRELVEKKLQLIESLSRKLAVLQEAQRGLQEDISANGALGED
VAARLQTLCTPGEFEKYRLFVGDLDKVVNLLLSLSGRLARVETALGRLGPHAPAEDKVAL
REKQRLLVAQLEDAKELKEHVGRREEAVGAMVARYLPAEHLQDYQHFIKMKSALIAEQRE
LEEKIKLGQEQLLCLRESLGQAPKDC
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggccgagggccggcccggcgcccccccccagtacgtgcatgtgcagctgcag
gggggcgcgccctggggcttcacgctgcgcggcgggctggagcacggcgagcccctcatc
gtctccaaggtggaggacgggggcaaggctgcgctctcctgccagctgcagccaggtgac
gagctggtgaacatcagtgggacgccactgtatgggtcccgtcaggaggccctgatcctc
atcaaaggctcctaccgcaccctgaagatgatcgtccgcaggaggagtgtgccggtcctc
cggccccattcctggcacgtggccaagctcaccgaaagccgccccgacgcccccgccatg
cactgccccactgacgccttcagcctctcttggccctcagggtgtgatgtcagcgagctg
tccatgcagtggaacccgctgtcccggcactgcagcaccgaccggagcagctccatcggg
agcatggagagcctggaccagcctggccaggcctactatgaaggggacccctcacccgtt
gaccagggcgtgtaccacagcaagcgggactctgcctacagctccttctctgccagctcc
atcgcctctgactgtgccctctccctccgccctgaggaggctgcctccgtcgactctggc
ctccaaggcccctgcaaggtccctgacgggcgctacctgaccacaggggctgagccgcct
gccagccggcactccgaggcctggcgggcgcctgtgcccccccagccacccgtcaggagg
gacagcctgcgggccgccccagctggtggaggggacaggcgccgggcatcggtgtcagtg
gacatgctgcacgccaagggccggtggatctccgacacctttctctgccagcgggacagg
gaggtggaggcagcgggtgggaggacaccagcgccatactccacgaaggaccgtctctct
gccgagcagtattacatgctgagctcccatccggacgagtgcccagctgagccgctcctg
gggaatagtgcagagcctggtgaccggctatacctggatggtggtgtgcacagagtgcct
gatgctgcagtggcgggtgacaacctgctgctctcgccgctcaagggccatgcaccgcac
cggcacagtgctcctgagcagctgctggcctcccagctctgctccctccaggtgggcact
ggcagtgggcgagcctcaccagcccccgatgggcaccgctggaccctttccccgttgcac
cctgagggcagccggccgggggccacaggggctgtgcaggacaccccgctctgcccagag
ccatgccgccgcctgccatcctgccgctgctgccctgagcctcagcgagcctgtgggcag
gacgggaggggtgccagcccagtgtgtggcaccgaggggccggcagaggaggagagccga
ccagggggccggcgggctgggggtcctccccaccgctctgctcagatgcgccgccgcagc
gaccgctttgccaccagcctgcgcaacgagattcagcggcgcaaggcccagctgcagaag
agccggggtcctggtgccccaccacctggcgaggagccggtggaggaggcagacgagtct
cctgagggcaacatgctggcagagggaccccacgcccctgctgagcatctcagccccatg
ctgagtgaggatggcaggaaccctggccacctgggggcccagggcatccccactcctgac
ccgctgccagtccccaaagggcccgcatcccccgagcgggtggtgccgatggggcggggc
cgctggcgctggtccccggagcgcaagctgcagcgacagtgttcacccaaccctggtgag
ctggagggctatggccaggggccaatggcccccagctccccaccacggggtagcgacgag
gccgtcctcctaccctttgctgaccgccgccggttcttcgaggagagcagccggccagcg
ccgcctcggcagggcaagccgccagcaggtgaccctggtaccttccagccccctggccct
gagcgccgggacgcccgccacctctccgtggaccagccctacggctccccctcgcctggc
caccctggctctgccagcccctacacggagcgctgccgggagcagcccccctgctacaag
cccctggggaggccggtggagctggagtacatgcggggcttctcctacccctgtgggggt
cccctacgccctgagccctgccactactgtgggggggacctgtgccccccgccgctgccc
cgtggccatgcctgccgatgccaccccaagccctgggcacgctgccctgactgctgctgc
ccggccccccaccccgggcgggacgagagtgacgcctggcccccccgaagagctttcacc
ccggaatttcccctggatgagtgggagccaccagcgataaccaggaaagccggccagtcc
atcagtgagctctcccgctaccaaatgggcttcccaaggcttggccccttccgcccctgc
tttgagagtgctgagccagattggccgccctgctaccgggccacgtccacacatgacctt
tcatgggatggtgactgcctggctcactcccctgagagccccccggaccccttgcaccgc
ccgctgcggggcagagcattctccgagagccacctcaacctagagcctgccagcccccgg
ggccgtgaccggaaggacattctccgtgccaagctggacccccctggcatccccaaaaag
aagggccctccacctccccgcccacctccccccaactgggagaagtacaggcagcgacgg
atgtcccagcacctgccaggtggttctgggcacagctctgccttcacagctgccccagtg
ccaagccgcagcattgctgaggctgtgcgtgaacggtcccagagcctcaccggggagcac
gggggccggtcccgggtgcatgccgctcacccccccgccccactgggctcctggccccga
cccgagcctcctggatcactctgcaggacgcctgagcccgatgctggcagcacagagatt
tgcaggacagcagggaccaggcaggagtggccgaaggcaaagcacccctgggagatggtg
gagcagccccaaaggcttggccggaaccaggagcggggctgggctggtctccgcggggtg
agtgagtgctccctgcccctgcgtggtggctccggccccaccacccgggaggcaaccaag
cccagcgtcagagcagcggaggaggcaagctgccagggaggccggccccagccccacccc
cgcatggactcggaagagctgctgtgggatgtggtgggcagggaccgctccatggccagc
atcctggccccctcggccccccttgtcaccgccaccgaggtggtgggtgagctgctggtg
gcaggggagcggcaggcctggcgggagcgtttccagcaggactggcgcctggaggccctg
gcgcaggacaggcagggctttgagcccatctcaccgcctcccgggagcactaccagctcc
accgcctaccccgcgtattacggtgtggcagcaggcacggctgagcctcttggtaaggtg
aaggagctgccagaggtggtggaggggagctcagaggatgaggaggaagaggtggaccgc
gagctggtggagaagaagctgcagctgattgagagcctgagccgcaagctggccgttctg
caggaggcacagcgggggttgcaggaggacatcagtgccaatggggcgctgggtgaggat
gtggctgcccgcctgcaaaccctgtgcaccccaggagagtttgagaagtaccgcctcttt
gtgggtgacctggacaaggtggtcaacctcctgctctccctctcggggagactggcccgg
gtggagactgccttgggccgcttggggccccatgcccccgctgaggacaaggtggccctg
cgggagaagcagcggctgctggtggcacagctggaagatgccaaggagctgaaggagcac
gtggggcggcgggaggaggcagtgggtgccatggtggcacgatacctgcctgctgagcac
ctccaggactaccagcacttcatcaagatgaagtcagccctcatcgctgagcagcgggag
ctggaggagaagatcaagctgggccaggagcagctcctctgcctgcgtgagagccttggc
caggcccccaaggactgctag
DBGET
integrated database retrieval system
