Phalacrocorax aristotelis (European shag): 142063438
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Entry
142063438 CDS
T11493
Symbol
ATG4A
Name
(RefSeq) cysteine protease ATG4A
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04136
Autophagy - other
parx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142063438 (ATG4A)
04136 Autophagy - other
142063438 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
parx01002
]
142063438 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142063438 (ATG4A)
03029 Mitochondrial biogenesis [BR:
parx03029
]
142063438 (ATG4A)
Peptidases and inhibitors [BR:
parx01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
142063438 (ATG4A)
Membrane trafficking [BR:
parx04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
142063438 (ATG4A)
Mitochondrial biogenesis [BR:
parx03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
142063438 (ATG4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
142063438
NCBI-ProteinID:
XP_074963314
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All DBs
Position
11:19908839..19921093
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AA seq
397 aa
AA seq
DB search
MESVLSRYENQITILSDYLEEFPETDEPVWILGRQHHLNTDKSKLLLDVSARLWFTYRRK
FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILRCFLD
RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
DIKKMCWSPPQSSSAAHSSAHLHRSALGRNKNAAGFCTGWKPLLLIIPLRLGINHINPVY
IDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQSFVDWEENGTVDDQSF
HCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQKHPPHW
PPFIPPAKPEVTTTGAELIESTDKLFELEEEFEILSV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggttttatctaggtatgaaaaccagatcactattttgtcagactacttagaa
gaattcccagaaactgatgagccagtgtggattctgggaaggcaacaccacctaaacaca
gacaaatctaagttattgttggatgtaagtgctcgtctctggtttacgtatagaaggaag
ttttcgcctattggaggcaccggtccttcgtctgatgctggctgggggtgcatgctgcgg
tgtgggcagatgatgctggcacaagcattgatctgcagacacttaggaagagattggcaa
tgggaaaaacacaaaaaacaaccagaagaatatcacagaatcttacggtgctttctagat
agaaaagattgctgttattccatccaccaaatggcacagatgggtgttggagaagggaaa
tcaattggagaatggtttggaccaaatacagttgctcaagtactgaagaagcttgcttta
tttgatgaatggaattcactagcagtttatgtatctatggacaatacagtggtcattgaa
gacatcaagaaaatgtgctggtcccctccgcagagcagcagcgcggcccacagcagcgca
cacttgcacagaagtgctcttggccgaaataagaacgcggcaggattctgcacaggctgg
aagcccctcttgcttattatacctctacggctagggataaatcacataaatccagtatat
attgatgcatttaaagaatgctttaagatgcctcagtctttgggagcattaggagggaaa
ccaaataatgcctattatttcataggatttttaggcaatgagctgatctacttggaccct
cacaccactcagagttttgtagattgggaagaaaatggcacggttgatgaccagagcttc
cactgccagcaagccccacacaggatgaagatcatgaatttggacccttcggtagcttta
ggcttcttttgcaaagaagaatgtgattttgataactggtgtagtcttgtacaaaaggag
attctaaagcaacagagtctacggatgtttgagctggtccagaagcatccaccacactgg
cctcctttcatacctccagcgaagccagaggtgacaaccacaggagcagaactcattgaa
tctactgacaagctatttgaattggaagaagaatttgaaatcctgagtgtatga
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