Phalacrocorax aristotelis (European shag): 142063543
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Entry
142063543 CDS
T11493
Symbol
TIAL1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142063543 (TIAL1)
03041 Spliceosome [BR:
parx03041
]
142063543 (TIAL1)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
142063543 (TIAL1)
Spliceosome [BR:
parx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
142063543 (TIAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
RBD_AKAP-17A
Tmrp11_N
Motif
Other DBs
NCBI-GeneID:
142063543
NCBI-ProteinID:
XP_074963477
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All DBs
Position
12:complement(17054129..17075495)
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AA seq
388 aa
AA seq
DB search
MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQH
TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQT
FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKN
FQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPSYGMYGQAWNQQGFGVDQSPSAAWMGG
FGAQPAQGQGAPVIPNQAGYGMASYQTQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgggcagcctaggaccctctatgtaggaaacctctccagagatgtgact
gaagttcttatacttcagttattcagccagattggaccatgcaaaagctgtaaaatgata
acagagcaacccgatagcagaagggtcaactcttctgttggattttctgttttgcagcat
acaagcaatgacccttattgctttgtggaattttatgaacacagagatgcagctgctgca
ttagctgctatgaatgggagaaaaattttgggaaaggaggtcaaagtaaactgggcaaca
acaccaagtagccagaaaaaagatacatccaatcacttccatgtgttcgttggggattta
agtccagaaataacaacagaagacatcaagtcagcatttgctccttttggtaaaatatcg
gatgcacgggtagttaaagatatggcaactggaaagtcaaaaggctatggttttgtatct
ttttataacaaactggatgcagaaaatgctattgtacacatgggaggccagtggttggga
ggccgtcaaatcagaactaactgggcaacacggaaaccaccagcccccaaaagtacacaa
gaaaataatacaaaacaattgagatttgaagatgtagtaaaccagtcaagtccaaaaaac
tgtactgtgtactgtggaggaattgcctctgggctaacagatcaacttatgagacagacc
ttttcaccgtttggacagattatggaaataagggtgtttccagaaaaaggttactcattt
gtcagattttcaacccatgaaagtgcagcacatgctattgtttcagttaatggaaccaca
attgaaggacacgttgttaaatgttattggggtaaagaatcccctgatatgactaaaaac
ttccaacaggtggattacagtcagtgggggcaatggagccaagtgtatggaaatccacaa
cagtatgggcaatatatggctaatgggtggcaagtaccatcatatggaatgtatggccaa
gcatggaatcaacagggttttggagtagaccaatctccatctgctgcctggatgggtgga
tttggtgctcaacctgcccagggacaaggtgctcctgtaatacctaaccaagctgggtat
ggtatggcaagctaccaaacacagtga
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