Phalacrocorax aristotelis (European shag): 142063784
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Entry
142063784 CDS
T11493
Symbol
RRP12
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
parx03009
]
142063784 (RRP12)
Ribosome biogenesis [BR:
parx03009
]
Eukaryotic type
90S particles
Other 90S particles
142063784 (RRP12)
Pre-60S particles
Other pre-60S particles
142063784 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
TOR1L1_N
CDI
Motif
Other DBs
NCBI-GeneID:
142063784
NCBI-ProteinID:
XP_074964030
LinkDB
All DBs
Position
12:7489579..7501202
Genome browser
AA seq
1292 aa
AA seq
DB search
MARSGRLRSGAAAKLKRWRKGHSSDCNPETRQHRLAARSRFCSRPAEKSNLTVDAVKLHN
ELQSGSLRLERPSDSAQLCMEEDDAGEAVTEKSSGTFLSGLSDCTNITFSKVQRFWESNS
AAHKEICAVLAAVTEVIRSQGGKESETEYFATLMTTLEVVESPESLAAVAYLLNLVLKRV
PSPVLIKKFSDASKVFMGIVSSQACSSSTSALRWVLSCLATLLRKQDLAAWSYPVTLQVY
HGLLSFCVHTKPKVRKAAQYGVCSVLRGSEFMFGDVAPDHHPAAPSTAKFCVQEIEKAGG
TKEATTTLHILALLRDLLPCFPAAVVKTCCETLLRVMTLSHVLVTACAMQAFHSLFSAQA
SVVCLPAELNAQIITALYDYVPSTSDLQPLLTWLSTMEQAHINLGRLQKDLCWAHLPRLF
STAMNCFLSPHSQVVAAAAQTLESLLSECVAPHTDDLGMISASAPAPAAYLCKMFRSVEE
GLTYRFHAAWDKVLRVLEVFFETCGKQCHPVMRKCLQSLCDLRLSPHFPYTAEVDQAVGA
AVSAMGPEVLLEAVPLEIDGKEETLDFPRSWLLPVLRDYVEGARLGFFTSYFLPLAAALK
SRALEFTKAGKSMEAKIYDTLQWQVWTLLPGFCTHPTDVLGAFKGLARTLGMAISERPDL
RPTVCQALRTLIHKGCETDAERAEVGRFAKNFLPILFNMYSQPEEDGGSSAQRRSVLDTV
RAYLTITDPQMVCGFLQKASEKLTSPDSSEFARLSILDLVVAMAPYADEQSLSSLYRTIQ
PSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVRSHLQDLQAALLDSLKSAASPAKRPRL
KCLFHIVKQLSAEHERFVTALVPEVILCTKEVSVGARKNAFMLLVEMGHAFIRFGPTPQE
AMQRFLLLVYAGLTGSVTMISCTVLALTRLFFEFKDHLELSVVEQLLQNICLLLASRTRD
VVKAALGFLKVTLLLVDTKLLAKHVQTMLEAVGNLSDDMRRHFRMKLRNLFTKFIRKFGF
DLVKGLLPAEYHKVLVNIRKAEARSRKQRAMRKAAADTDEEEVPLAQPKGDSMEEILADS
EDEEEERQQSKEWRKQAQQKGQAWLKEGEDDEPLNFLDPNVSQRVLATKPGPKRSRGVSH
DFQVSEDGRLIIHEEEEEVNDDEAKGADEEMADVLQDVGLRSKKSQKRRFREEPDDEEPE
VGTYNQYRPGGSGIHRQLDKKPAFGAEYRSKKGKGDVKKKGQLDPYAYIPLNRARLNRRK
RAKMQGQFKGLMKGAQRGAKAGRKNHLKAQRP
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagcgggcggctccgttcgggcgccgccgccaaattgaagcggtggcggaag
ggccacagcagcgactgcaaccctgagacacgccagcaccgcctggccgcccgcagccgc
ttctgcagccggcccgcggagaaaagcaacttgacggtggatgcggtaaagctgcacaat
gagctgcagtcggggtccctgcgtttggagcgcccaagtgacagcgctcagctctgtatg
gaggaggatgatgctggggaggctgtcacagagaagtcatctggcaccttcctgagtggg
ctgagtgactgtaccaatatcaccttcagcaaggtgcagcgcttctgggagtccaactct
gctgctcacaaagagatctgtgccgtgctggcagctgtgacagaggtgatccgctcgcag
gggggtaaggagagtgagacggagtactttgccacgctgatgaccacgctggaggtagtg
gagtcccctgagtctctggctgctgtcgcctacctgctcaacctcgtcctaaagagggtc
ccaagccctgtgctcataaaaaagttctcagatgcctcaaaagtcttcatgggcattgtg
tcgtcgcaggcctgcagcagttccacctctgccctgcgatgggtcctgtcttgcctggcc
acactgctacggaagcaggatttggcagcctggagttacccagtcaccctccaggtctat
cacggcttgctgagcttctgtgttcataccaagccgaaggtgcggaaagcggcacagtac
ggtgtgtgctctgtcctgaggggcagtgagttcatgtttggagatgtggccccagatcat
caccctgcggcaccctccactgccaagttctgcgtgcaggagattgaaaaagctggaggc
accaaggaggcgaccaccaccctgcacatccttgccctgctgcgggacctgctgccctgc
ttccccgcggccgtggtgaagacctgctgcgagaccttgctccgagtcatgacccttagc
catgtgctggtgacagcgtgtgccatgcaagccttccacagtctcttcagtgcccaggcc
agcgtggtctgcctgccagctgagctcaacgcccaaatcatcaccgccctctacgactac
gtgcccagcacaagtgacctgcagccgctgctgacctggctgtccaccatggagcaggca
cacatcaacctgggcaggctgcagaaggacctgtgctgggctcacctgccccggcttttc
tcaactgccatgaactgcttcctctccccgcactcccaggttgtggcagcagcggcacag
accctggagagcctcctgagcgagtgtgtcgctcctcacacagatgacctgggcatgatc
tctgcatctgccccagcccctgctgcctacctgtgcaagatgttcagatcagtggaggag
ggcctgacgtatcgtttccatgcggcatgggacaaggtgctgcgggtgctggaggtcttc
tttgagacatgtgggaagcagtgccaccctgtcatgaggaagtgtctccagtccctgtgt
gacttacgtctgtccccacacttcccctacaccgctgaagtggaccaggcggtgggggct
gccgtgagtgccatgggccccgaggtgctgttggaagctgtgcccctggagattgatggc
aaggaggagacactggacttcccccgtagctggctcctgccagtgctgcgggactacgtg
gagggcgcgcggcttggcttcttcaccagctacttcttgcccttggcagctgccctgaaa
agcagagccctggagtttacgaaggctgggaagagcatggaggccaagatctatgacact
ctgcagtggcaggtctggaccctgctgcctggcttctgcacccaccccacagacgtgctg
ggggccttcaaggggctggcccgcaccctgggcatggccatcagtgagcgcccggatctg
cgccccactgtgtgtcaggccttgcgcaccctcatccacaaaggatgcgagacagatgcg
gagcgggcagaagtgggtcgctttgccaaaaacttcttgccaatcctgttcaacatgtac
agtcagcccgaggaggacgggggtagcagtgctcagcgccgctctgtgctggacactgtc
cgtgcttacctgaccatcactgacccccagatggtgtgtgggttcctgcagaaagccagt
gagaagctgaccagtcccgacagctccgagtttgccagactctccatcctggacctcgtg
gtggcaatggcaccctatgctgatgagcagtccctcagctccctgtaccgcaccatccag
ccttccctccagagcaaggagcgcagcatgcagaagaaggcataccgtgtgctggaggag
gtgtgtgctgctccccatgctccctgccaggcctttgtccgctcccacctgcaggatctg
caggcagcactgctggactcactcaagagcgcggcatccccggccaagaggccccggctg
aagtgcctgttccacatcgtgaagcagctctccgcagagcacgagcgctttgtcactgcc
ctggtcccagaggtcatcctctgcaccaaggaggtgtcagtgggggcccgcaagaacgcc
ttcatgctgctggtggagatggggcatgccttcattcgcttcgggcccaccccacaagaa
gccatgcagcggttcctgctcctggtgtacgcggggctcacgggctcggtcaccatgatc
agctgcacagtgctggcgctgacccgcctgttctttgagttcaaagatcacctggagctg
agcgtggtggagcagctcctgcagaacatctgtctgctgttggcctcccgcacacgggac
gtagtgaaggcagcgctgggattcctcaaggtcacactgctgctggtggacaccaagctg
ctggccaagcatgtccagacaatgctggaggccgtggggaacctttcagatgacatgaga
cgccacttccgtatgaagctgcgaaacctcttcaccaagttcatccgcaagtttggcttt
gatctggtgaaggggctgctaccagctgagtaccacaaggtgctggtgaacatccgcaag
gcagaagcccggagccgcaagcagcgtgccatgaggaaggcagctgcagatacagacgaa
gaggaggtaccactggcacagcccaaaggggacagcatggaggagatcctggctgactca
gaggacgaggaggaggaacgacagcagagcaaggagtggaggaagcaagcacagcagaag
ggccaggcctggctgaaggaaggggaagacgatgagcctctcaatttcctggaccccaac
gtgtcccagcgggtgctggccaccaagccaggccccaaacggtccagaggagtgagccat
gacttccaggtgtctgaggatgggcgcctgatcatccatgaagaggaggaggaggtgaac
gatgatgaagccaaaggagcagatgaggagatggcagacgtgctgcaagatgttggtctc
cgcagtaagaaaagccagaagcgtcggttcagagaggagccggatgatgaggaacccgag
gttgggacctacaatcagtacagacctggaggctctgggatccaccggcagctggacaag
aagccagcctttggtgcagagtacagatccaagaaaggcaaaggtgacgtgaagaagaag
ggccagctcgacccctatgcctacatccccctgaacagagcgagactcaacagaaggaag
cgggcgaaaatgcagggccagttcaagggcctgatgaagggtgctcagcgcggggctaag
gccggacgcaagaaccatctgaaggcccagcgcccctga
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