Phalacrocorax aristotelis (European shag): 142063798
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Entry
142063798 CDS
T11493
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142063798 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
parx04990
]
142063798 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
parx04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
142063798 (PDLIM1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
142063798
NCBI-ProteinID:
XP_074964051
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All DBs
Position
12:596664..643017
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AA seq
327 aa
AA seq
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MGTHRIVLSGPGPWGFRLVGGRDFEQPLTISRVTPGSKAAIANLCIGDQIVAIDGVNTDD
MTHLEAQNKIKGCTDELTLTVSRTESKVWSPLVNEEGKTHPYKMNLASQPQEIRHIGSAH
NRSAVPFTAATASAPRVITAQYNSPAGLYSSENIQTFNSAVESKTSPGALEPTKPLDQHN
QPPGSIVIDRESEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCEKCGSGIVGVFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVQ
DQIYCEKHARERVVPPEGYEVVTVFPK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcaccgcatcgtactgtcgggccccgggccctggggcttccgcctagttggc
ggccgggacttcgagcagcccctcaccatctcccgggtgactccaggtagcaaagctgca
atagccaacttgtgtataggagaccagatcgtagccattgatggagtgaacacagatgac
atgacgcaccttgaggcacagaacaaaatcaagggttgcacagatgaactaactctgaca
gtcagcagaacagagtcaaaagtctggtcaccacttgtaaatgaggaggggaagacgcat
ccttataagatgaatctggcctctcagccgcaggaaataaggcacataggaagtgcacac
aaccggagcgcggtgcccttcactgctgccacggcttctgcccccagagtgatcactgct
cagtacaacagcccagcaggcctctactcctcagagaacatccagaccttcaacagtgcg
gtggagtcaaagacatcacctggggccctggagcctaccaagcctttagatcagcataac
cagccccccggcagcatcgtcatagacagagaatctgaggtttacaagatgctccaggag
aatcaagagtccaatgagccacccagacaatctgcttccttcctcgtattgcaagagatt
ttggagtcagaagagaaaggggaccctacaaaaccatctggatttaggagcgtcaaagcc
cccaccacaaaggtggcatcatcgattgggaatgcccagaagctccccatgtgtgagaag
tgtggatctggcattgtaggggtgtttgtgaagatccgggacaagcagcgtcaccccgag
tgctatgtgtgcagcgactgtggcaccaacctcaagcagaaaggacacttcttcgtgcaa
gaccagatctactgtgagaagcatgcccgggagcgggtggttcccccagagggctatgag
gtggtcaccgtcttcccaaagtaa
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