Phalacrocorax aristotelis (European shag): 142063895
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Entry
142063895 CDS
T11493
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
142063895 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parx03036
]
142063895 (ERCC6)
03400 DNA repair and recombination proteins [BR:
parx03400
]
142063895 (ERCC6)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
142063895 (ERCC6)
DNA repair and recombination proteins [BR:
parx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
142063895 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
142063895
NCBI-ProteinID:
XP_074964369
LinkDB
All DBs
Position
12:complement(3284914..3333470)
Genome browser
AA seq
1508 aa
AA seq
DB search
MMMWFFFVAFEQRMPTDNNHLPGSIQEQDPVPTSSDNCLRNAEELGIEQENGICDSDLGN
SIRVPSSVSQLSASMALEVPRRGQPLLQINRQQIQAISHSAQAAELKGLGVDVYDQDVLE
QGVLQQVDNAINEANKATKIADAGKEYQSVLDDLRSCTTSLKQINKIIEQLSPQAADNKD
INRKLDSVKRQKYNKEQQLKKIKAKQKRLQAILGGTEILDKVNEIEFEEDEEPGPSCLGS
MLMPVQETEWEELIRTGQMTPFGTKIPQKPERKARRLMLNETSDFEKYLADQAKLSSERK
KLSLHKGAKKKAQAKNVQCVAPTSTTKEKKGKALSKTDKRLKKHMRKLQKHALQIQSKAQ
IPKEKKYLEAKKFRHEQEDDSGESEYVPDEELFGPEAAEEEKQASSHAENSSDYELKNSS
RKIKYTVKRDFKGAEDDDFFPSSEEEEHALRKRKVKRWRDDGDQGYYKQRLRRWQKERLK
DEEHQTAEELSEESDTEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMG
LGKTIQIIAFLAGLSYSKIRTRGSNYRYQGLGPTLIVCPATVMHQWVKEFHTWWPPFRVA
ILHETGSYTNKKVKLIQEIASCHGILITSYSYIRLMQDDIHSYDWHYVILDEGHKIRNPN
AAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGG
YSNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSISLPDKNEQVLFCRLTVEQCQV
YQNFINSKEVYQILNGDMQIFSGLVALRKICNHPDLFTGGPRILKGVQDAEAEEADQFGY
WKRSGKMIVVESLLKIWHKQGHRVLVFTQSRQMLQVLEVFVRDRNFSYLRMDGTTTIASR
QPLITRYNEDKSIFIFLLTTRVGGLGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQK
KQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDVSQ
GTETSAIFAGTGSDVKVPKHQLKRKLEKPPDNDTSKGDLHLTESSSPKPSESSNSCSTTH
MTTSSKATEASEETNGNLGAYDQNSYAKDNAQAATNINSLNESKEESLERADRSMSQSLP
GDAGPSQNAKSLNAVVADEGRGAANANVKGDSSLTGGAAASWEKQVAKTENGQLDNNHYK
CTSKTKHRVDTLSRESHKDKSKKKHHKDARFEGERIPHLVKQKRYKRENSEEKEEDSKKN
DDYVLEKLFKKSGVHSVMKHDVIMEASSADYVVVEAEANRVAQDALRALKVSRQRCLGAA
SGVPTWTGTSGLSGAPSGVKIRFGQKKNPMLLSSHSTCASPAKKCKAVDTIKKENIKKCS
SNGHFDGKSGESSSSALDSSSLLSKMRARNHLILPQQTGNEGDENHLQAPAPTLGSTEYD
ELLVDVRNFIAFQARVNGEASTQELLHEFESKLPVAQSCVFRELLRNLCTFHRNPNGEGV
WRLKPEFH
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtggttcttctttgttgcctttgagcagaggatgccaacagacaacaaccac
ctgccaggcagtatccaagaacaagaccctgttcctacttcaagcgataattgcctgcgt
aatgctgaggaattgggaattgaacaagaaaatggcatttgtgacagtgacctgggtaac
agtattagagttcccagctccgtcagccagttgtccgcttccatggctttggaggtgccc
agaagaggacaaccccttttacagatcaacaggcagcagattcaggccatctcacatagc
gcacaggctgctgagctcaaaggtttaggagttgatgtctatgaccaggacgtactggag
caaggagttcttcagcaagtagataatgcaattaatgaagctaataaagcaacaaaaata
gctgatgcggggaaagaataccagtcagtgctcgatgacttaagatcatgtacaacatct
ctgaaacaaataaataaaattattgagcaactttcacctcaagctgccgacaacaaagat
ataaacagaaaactagattctgtaaaacggcaaaaatataacaaggagcaacagctaaag
aagatcaaagcaaaacaaaagcgtctccaagcaattcttggtggaacagagattcttgat
aaagtaaatgagattgaattcgaggaagatgaagaacctggtccatcatgtcttggcagt
atgcttatgcctgttcaggagacagagtgggaagagctgattcgtactggccagatgact
ccatttggaactaaaatacctcagaagccagagaggaaggcacgacgattaatgctaaac
gaaacatctgattttgagaagtacttggcagaccaagctaagctgtcatctgaaagaaaa
aagctatcccttcacaaaggagcaaagaagaaagcacaagccaaaaatgttcaatgcgta
gctcccacatctactacaaaggaaaaaaagggtaaagccctgtcaaaaacagataagcgc
ttaaaaaaacatatgagaaaacttcagaagcacgcccttcagattcagtcaaaggcgcag
attccaaaagaaaagaaatatcttgaggccaagaagttcaggcatgaacaggaggatgat
agtggagagtctgagtatgtgcctgatgaggagctctttggtccagaagcagcagaggag
gagaagcaggcatcttctcacgctgagaatagttctgattatgagctcaagaattcgtca
agaaaaataaaatatacggtgaagagagattttaaaggagctgaagatgatgacttcttt
ccaagctctgaggaagaagagcatgcgctgcgaaagcgcaaagtaaagagatggagagat
gatggagatcaaggctattataaacagagactaaggaggtggcaaaaagaacgtttgaag
gacgaagagcatcaaacagctgaggaactttctgaagaaagtgacactgaatttgaagag
ggtttcaaagtaccaggatttctcttcaaaaagctttttaagtaccagcagacaggtgtt
aggtggctctgggaattgcactgccagcaggcaggaggaattctgggagatgagatggga
ttgggcaagaccatccagataattgccttcttggcaggtctgagctacagcaagatcagg
actcgcggttcaaattacaggtaccagggattgggtccaacactgattgtttgtccagct
actgtgatgcatcagtgggtaaaagaattccacacttggtggcctccgtttagagttgcc
atcctccatgaaactggttcttataccaacaaaaaggtgaaactaatccaggaaattgct
tcatgccatggaattttaattacgtcttactcatatattcgactgatgcaggatgacatc
cacagctatgactggcattatgtgattctggatgagggtcacaaaatccgaaatccaaat
gccgcagtcacgcttgcatgcaagcagttccgcacaccccatcgaatcatcctgtctggc
tcccctatgcaaaataacctaaaggagctctggtccctctttgactttgtattcccaggg
aaactgggaacgctgcctgtgttcatggagcaattttctgttccaataaccatgggagga
tattccaatgcctctcctgtccaggtaaaaactgcatacaagtgtgcctgtgtgttacgg
gacactataaacccttacttgctgcgaagaatgaaggctgatgtaaaaatgagcatttca
cttccagataaaaatgaacaggtcctcttttgccgtttgacagtcgagcagtgtcaagtc
tatcaaaatttcatcaactctaaagaagtttaccagatcctcaatggagacatgcagatt
ttctcaggactggtagctttgagaaagatttgcaaccaccctgacctcttcactggtggt
cccaggattttgaagggtgtacaagatgctgaagcggaggaagcagatcagtttggatat
tggaaacgttctggaaaaatgatagtggtagaatccttgctgaaaatatggcacaagcaa
ggtcacagagtgttggttttcactcagtcaagacagatgctgcaggtacttgaagtcttt
gtgagagacagaaacttctcctacctcaggatggatggcaccacaacaatagcttccaga
cagccccttataacaagatacaatgaggacaaatccatatttatttttcttctaacaact
cgtgttggtggccttggagttaacttgactggtgccgaccgggttattatttatgatcct
gactggaatcccagtacagacacgcaggctcgggaacgtgcttggagaataggccaaaag
aaacaggtgactgtgtataggcttctcactgcaggtactattgaagagaagatataccac
agacaaatcttcaagcagtttttaacaaacagagtgctgaaagaccctaagcagaggcgc
tttttcaaatccaatgacctttatgaactttttactctgagcagcccagatgtgtctcag
gggacagaaacaagtgcaatctttgcaggtactggttcagatgttaaagtcccgaaacac
caattgaaacggaaacttgaaaagccacctgataatgacacttctaaaggtgatctccat
ctcacagaaagcagctcaccaaagcccagcgagtcatccaattcctgctcaaccacccac
atgacaacttcttctaaagcaacagaggcaagtgaagaaaccaatggaaatttgggagct
tatgaccaaaatagctatgcaaaagataatgcgcaagctgctactaatataaattcactg
aatgaaagcaaggaggaaagcttggaaagagctgacagatctatgtcccagtcattgcca
ggtgatgcagggccttcacagaacgccaaatctctgaacgctgtggtggctgatgaagga
cgtggagcagctaatgcaaatgtcaagggagattctagtctcacgggtggtgcagctgca
tcttgggaaaagcaggttgctaaaactgaaaatgggcaattagataataaccattataaa
tgtacctcaaaaacaaagcacagagtggatacgctgtcacgtgagagccacaaagataag
tctaagaagaaacatcacaaagatgccagattcgaaggggagcgtattcctcatctagtg
aaacagaagcgatacaaaagggagaacagcgaagagaaggaggaagactcaaagaaaaat
gatgattacgtcttggagaaacttttcaaaaaatcaggggtacacagtgttatgaagcat
gatgtcattatggaagcttccagtgcagattatgtggtggtggaagcagaagcaaacaga
gtggcccaggatgccttaagagccttaaaagtctctcgacagcgatgtttaggagctgct
tctggtgtgccaacatggacaggcacgagcggtctttcaggtgcaccgtcaggagtgaag
attcggtttggtcagaaaaaaaaccccatgctgctttcttcacattccacttgtgcatca
cctgcaaagaagtgcaaggctgtggatacaataaagaaagaaaacataaagaagtgtagt
tccaatgggcattttgatggaaaatctggagaatcgtcgtccagtgcactagactcttca
tctttattatctaagatgagggcaagaaaccaccttattttaccacaacagacagggaat
gagggagatgagaatcacctgcaagcacctgccccaaccctgggttcaacagaatacgat
gaactgctcgtggacgtgcgtaacttcatcgcgttccaggcccgcgttaatggcgaggca
agcacccaggagctactgcacgaatttgagtccaaactgcctgtggcacagtcctgcgtc
ttcagagaacttctccgcaatctctgcaccttccatagaaacccaaacggtgaaggtgtc
tggaggctaaagccagaattccactga
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integrated database retrieval system
