Phalacrocorax aristotelis (European shag): 142064050
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Entry
142064050 CDS
T11493
Symbol
GDF5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04060
Cytokine-cytokine receptor interaction
parx04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
142064050 (GDF5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
142064050 (GDF5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
parx04052
]
142064050 (GDF5)
Cytokines and neuropeptides [BR:
parx04052
]
Cytokines
Transforming growth factors (RSTK binding)
142064050 (GDF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
142064050
NCBI-ProteinID:
XP_074964676
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Position
13:complement(822079..827069)
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AA seq
500 aa
AA seq
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MKILYFLTLLLWHLTWLSLDLVPGALSNSEAGQNNPGSKTGFLKAEGKERNPSTRTGTLR
TASHGYSTGTSKARTKSSAVQTGALLAKNNESKKVFSRTAPTEGKVGYLPSRPSGVRTVT
PKVQNLNIKVALKKTGTSSTDTDSFKSKKTKEPVTQRETKETFRHPPITPHEYMLSLYRA
LSDTERKDVNGSVKLEAGLANTITSFIDKGQDERAQTTRKQKYIFDISALEKDGLLGAEL
RILRKKPSDTWKSHSSGKTCQVKLFSCSTNRQAATLLDSRTISITDTPKWEVFDIWKLFR
NFKNLVNLCFELETFDRGRAVDLRSVGFNRTGRQVNEKALFLVFGRTKKRDLFFNEIKAR
SGQDDKTVYEYLFNQRRKRRAPLATRQGKRPTKNLKARCSRKALHVNFKDMGWDDWIIAP
LEYEAYHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDS
ANNVVYKQYEDMVVELCGCR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgtattttctcactttactgctttggcatttgacttggctctctctggat
ctagttcctggagcactgagtaattctgaagcaggccagaataatccaggatctaaaaca
ggttttttaaaagcagaaggaaaagagaggaatccctcaacacggacaggtacactgagg
actgcaagccatggatatagtactggaacctcaaaggctaggactaaaagcagtgctgtt
cagactggagctctgctggccaagaacaatgaatcaaagaaggttttctcaagaacagca
cccacggagggcaaggtaggatatctccccagcagaccttctggagtaaggacagtgaca
ccaaaggtccaaaatcttaacatcaaggtggctttgaaaaaaactggcacaagcagtact
gacactgattctttcaaaagtaaaaagactaaagagcctgtaacccagagggaaactaag
gaaactttcagacatccccctataacgccacatgaatacatgctctctttgtacagggct
ctctcagatacagaaagaaaagatgttaatggaagtgtaaaactggaggctggacttgcc
aatacaataaccagctttatagacaaaggacaagatgagcgagcgcaaactacaagaaaa
caaaaatatatttttgacatcagtgcattagaaaaagatggtttgctaggagcagagctt
cgaatattgaggaaaaagccttctgatacgtggaagtctcattcttctggaaaaacttgc
caagtgaaattatttagttgctctacaaacagacaagcggcaacactcctggactctcgt
actatcagtatcacagatacaccaaagtgggaagtgtttgacatatggaaacttttcaga
aactttaaaaacttggttaacttgtgttttgaactggaaacttttgacagggggagagct
gttgatctcaggagtgtgggatttaatagaacaggaagacaggtcaatgaaaaggctctc
ttcttggtatttgggaggacaaaaaaaagagacttattcttcaatgaaatcaaagctaga
tctggccaagatgacaaaactgtttatgagtacttattcaatcagaggcggaagagaaga
gctcctctagcaacgcggcaagggaagaggcccactaagaatctgaaggcaaggtgtagc
agaaaagccctccatgtgaattttaaggatatgggctgggatgactggataatagcccct
ctagaatatgaagcgtatcactgcgaagggctttgtgaattcccccttcgatcccatctg
gagcccaccaatcacgcagttatccaaacattaatgaactcaatggacccagaatcgaca
ccgccaacttgctgtgtcccaaccaggctgagtcctattagcattcttttcattgactct
gcaaacaacgtggtctataagcagtatgaggacatggtggtggagttgtgtggttgtagg
tag
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