Phalacrocorax aristotelis (European shag): 142064122
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Entry
142064122 CDS
T11493
Name
(RefSeq) interferon regulatory factor 4-like isoform X1
KO
K09445
interferon regulatory factor 4
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
parx03000
]
142064122
Transcription factors [BR:
parx03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
142064122
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Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
142064122
NCBI-ProteinID:
XP_074964812
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Position
13:9777580..9780966
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AA seq
480 aa
AA seq
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MAEPGAPMRLKEWLIAQIDSGRYPGLRWENRHRTLFRIPWKHAAKQDYRQQQDAALFKAW
AVYKGKYHEGTDKADPSTWKTRLRCALNKSTDFQEVPERSQLDISEPYKVYQIVSDGAQD
AEKDDGTRSPAGEDQQVSQPPTLCRLLQELPAGWRSCQTQAGDLPVHKVHGGGTSQLRGP
CCQLSRHHSCSHPQGSATGSPEEESQKGTMEPCHMSPLPLLSAHPAERGYHVRGVFYGWN
PTHSHLLPGPPSYLPVEDVNHSDCWLHVRLYYCDMLVKEVTTRTAEGCRITSRAVPADSE
RLYGPSCMEQIEFPPPRALSGSGRVASMTDVLERLLPHLERGVLLWVAPEGVFMKRQCQG
RVYWNGPLAPHRDWPNKLEREKTYKLLDTQQFLQQLRGYLSHGQPMPQYQIHLCFGEEYP
TSAGHHFQKLIMAHVEPVFARELFHHAQRMGPMLLRDSPQPCSPGASSHIIHVLKQLCQP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgggggcgcccatgcggctgaaggagtggctgatcgcgcagatcgacagc
ggccggtacccggggctgcgctgggagaaccggcaccggacgctcttccgcatcccctgg
aagcacgcggccaagcaggactaccggcagcagcaggacgccgcgctcttcaaggcttgg
gccgtctacaaggggaagtaccatgaggggacggacaaggccgacccctccacctggaag
acgcggctccgctgcgccctcaacaagagcaccgacttccaggaggtgcctgagcggagc
cagctggacatctccgagccctacaaggtctatcagattgtatccgatggcgcccaggat
gctgagaaggacgatggcacacggtccccagccggggaggatcagcaggtgagccagccc
cccaccctgtgccgtctgctgcaggagctgcctgcaggctggagaagctgccagactcag
gcaggggatctgccagtgcacaaggtccatggcggtggcacaagtcagctcaggggcccc
tgctgccagctcagccgtcaccacagctgctctcatccccagggcagtgccacagggagt
ccagaggaggaaagccagaagggcacaatggagccatgccacatgtctccgctgcccctg
ctctctgcccacccggccgagcgagggtaccatgtgaggggagtcttctatggctggaac
ccaacccacagccacctcctccccggacctccatcctacctccctgtggaggacgtcaac
cactcagactgctggctccacgtccgcctctactactgtgacatgctggtgaaggaggtc
actacccgcacggccgagggctgccgcatcacctcccgcgctgtgccagctgacagtgag
cgcctctacggcccctcctgcatggagcagattgagttcccaccaccacgggcgctcagc
ggcagtggccgggtggccagcatgactgatgtgctggagcggctcctgccccacctggag
cgtggcgtgctgctgtgggtagcacccgagggggtcttcatgaagcgccagtgccagggc
agggtgtactggaatggaccactggccccacacagggactggcccaacaagctggagagg
gagaagacctacaagttgctggatacacagcagttcctgcagcagctgcgggggtacctg
agccatgggcagcccatgccgcagtaccagatccacctgtgcttcggggaggagtacccc
accagcgccgggcaccacttccagaagcttattatggcccatgtggagccagtgtttgca
cgagagctcttccatcatgcccagcgtatggggccgatgctgctccgcgactccccccag
ccctgctcccctggtgcctccagccacattatccacgtcctcaaacagctctgccagccc
tga
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