Phalacrocorax aristotelis (European shag): 142064215
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Entry
142064215 CDS
T11493
Symbol
DDX27
Name
(RefSeq) putative ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
parx03041
]
142064215 (DDX27)
03009 Ribosome biogenesis [BR:
parx03009
]
142064215 (DDX27)
Enzymes [BR:
parx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142064215 (DDX27)
Spliceosome [BR:
parx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
142064215 (DDX27)
Ribosome biogenesis [BR:
parx03009
]
Eukaryotic type
Pre-60S particles
Helicases
142064215 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
FerA
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
142064215
NCBI-ProteinID:
XP_074964966
LinkDB
All DBs
Position
13:8762438..8769605
Genome browser
AA seq
782 aa
AA seq
DB search
MLQSLGLVGTIAEGDAGPEDPESGGSEDEEVGLSRVCCLGRAGPGCDRCSSVLPQELRRA
PGLGRRGPAGGDFSAAFIFGEAEAGGEGAWAAALRQLRGKRAATTLDEKIEKVRQKRKSQ
EREAKQAKVRDEDAETEDNQIKKEECEDFSRDEEEDAESQYSLDDETIFTKADTVKVKER
KRSKKGEKEAESFFEDASQYDDNLSFQDMNLSRPLLKAITAIGFKQPTPIQKACIPVGLL
GKDICACAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQ
FSSVTTCLAVGGLDVKTQEAALRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEAD
RMLDEYFEEQMKEIIRLCSNHRQTMLFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAPF
LRQEFIRIRPNREGDREAIVSALLTRTFPDHVMLFTQTKKQAHRMHILLGLMGLRVGELH
GNLSQAQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRT
ARAGRAGRSVSLVGEEERKMLKDIVKAAKTPVKARILPQDVILKFREKIENLEKDVYAVL
CLEREEREMQQSEAQINRAKKQLETGKQEAAGEGLERSWFQTREERKKEKLAKALQEFDL
ALRGKKKRKKFMQDRQKKAQMTPEERSQFEILKSQMYAERLAKRNRRAKRARALPEEEPA
AAPAGPKRKKKLSVFDEELTNTSRKALKQYRAGPSFEDRKRLGMTQHRKGGNFKSKSRYK
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagagcctggggctggtgggcaccatcgcggagggggacgcggggcctgaggat
cccgagtctgggggctccgaggatgaggaggtggggctgagcagggtctgctgcctgggc
cgggccgggccgggatgcgatcgttgctcatcggttttaccgcaggagctgcgccgggcg
ccgggcctcgggcgccggggccccgcaggaggagacttcagcgctgccttcatcttcggc
gaggcggaggccggcggggaaggcgcctgggcggcggcactgcgccagctgcgcggcaag
agagcggccacgacgctggatgagaagattgagaaagtgagacagaaaaggaagtcccag
gaaagagaagctaaacaagcaaaggtgagagatgaagatgcagagactgaggataatcaa
atcaaaaaggaggagtgtgaagatttcagtagggacgaagaagaggatgcagagtctcag
tattcattagatgatgaaactatcttcacaaaagcagatacggtcaaagtgaaggaacgg
aagagatcaaaaaagggagaaaaggaagcagagagcttttttgaagatgcctctcaatac
gatgataacttgtcattccaggacatgaatctttcacgacctttgctaaaggcaatcaca
gcaattggcttcaagcaaccaacgccaattcagaaggcctgtatcccagtgggccttctg
gggaaggatatttgtgcctgtgctgctactgggacaggtaaaacagctgctttcatcttg
cctgtccttgagcgcctgatttacaaacctcgtcaggctccaattacacgggtgttggtt
ctagtgccaacacgagaactgggtattcaggtgcactctgtcacaaaacagctggcacag
ttcagcagtgtcacaacttgccttgctgtaggtggcctagatgtgaagactcaggaagca
gctctgcgctctgggccagacattctcattgccactcctgggcgactgattgatcatctc
cacaactgcccttctttccacctgagcagtgttgaggtgctgattttggatgaagcggac
aggatgctggatgaatactttgaggaacagatgaaggaaataatcaggttgtgctccaac
caccgtcagacaatgcttttctctgccacaatgacagaggaggtgaaagatttggcttct
gtttccctgaaaaatcctgtccgaatttttgtgaacagcaacacagatgttgcccctttc
ctgcggcaggaatttatccggatcagacccaaccgagagggggaccgtgaggccattgta
tcagctctactgacacgaaccttcccagatcatgtgatgcttttcacccagaccaagaag
caagctcaccgtatgcacatcctgcttgggctgatgggtctacgggtcggggagcttcat
gggaacctctctcaggcacagcggctggaagcactcaggcgctttaaggatgagcagatt
gatattctggtagctacagatgtggctgcacgtggacttgatattgaaggtgttaaaaca
gtaatcaattttaccatgcccaacaccaccaaacactacgttcatcgagtggggcggaca
gcaagagcaggcagggctggtcgttcagtttcacttgtgggtgaggaagagcgcaagatg
ctgaaagatattgtgaaggctgccaaaacaccagtgaaagccagaattctcccgcaagat
gtcatactaaaatttcgagagaagattgagaatttagagaaagatgtgtatgcagttctg
tgcttagagcgtgaggaacgtgagatgcagcagtcagaggcccagatcaatagggcaaag
aagcagttggagacaggaaaacaagaggctgcgggtgagggtttggagcggagctggttc
cagacccgtgaggagaggaagaaggagaaattggctaaagccctgcaggagtttgaccta
gcattacgaggcaaaaagaaaaggaagaaatttatgcaggacagacagaaaaaagcccaa
atgacaccagaggagaggtcacagtttgaaatcttgaaatctcaaatgtatgctgagcgg
ctggcaaaaaggaatcgccgagcaaagcgagccagagccttgccagaagaggaaccagca
gcagcaccagcaggccccaaacggaagaaaaaactgtctgtgtttgacgaagagcttacc
aacacaagcaggaaggctctgaagcagtaccgtgccggcccatcatttgaagatcgaaaa
cgcttgggtatgacccagcataggaaaggaggaaacttcaaatccaagtccaggtacaag
agaaagtaa
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