Phalacrocorax aristotelis (European shag): 142064659
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Entry
142064659 CDS
T11493
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03272
Virion - Hepatitis viruses
parx04145
Phagosome
parx04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
142064659 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
142064659 (SCARB1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
142064659 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142064659 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
parx04147
]
142064659 (SCARB1)
Membrane trafficking [BR:
parx04131
]
Endocytosis
Phagocytosis
Scavenger receptors
142064659 (SCARB1)
Exosome [BR:
parx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142064659 (SCARB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
PAGK
PorA
Motif
Other DBs
NCBI-GeneID:
142064659
NCBI-ProteinID:
XP_074965983
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Position
15:complement(11044281..11066371)
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AA seq
505 aa
AA seq
DB search
MAAARRRVSLGLGLAGAACALLGLCLLLVGPLIIKEQVIKNVRIDPSSISFSMWKDMPVP
FYMSVYFFEVLNPKEVLQGAKPMLNQRGPYVYREFRYKTNITFHDNDTVSYLEYRKLFFQ
PELSNGSEEEYIVVPNIMMMGAAVMMENLPNFVKLLLSGALAGLKQEAFMNRTVGEIMWG
YEDPLIDTINTFVPGLIPFKGKFGLFIDFNNSNSGLFTVNTGVKNISRVHMVDSWNGLKK
MNYWRSSECNMINGTAGEMWPPFMSPTSLEFYSPDACRSMTLVYEQSGKFQGVPIYRFVA
PKTLFANGTDYPPNEGFCPCMQSGILNVSTCRQNAPMFISHPHFYNADPALVNAVKGLHP
SKDQHGLFLDVHPVTGIPMNCSVKLQLNLYMKQVSGIIQTGKIKPVVLPLLWFAESGSIE
GPVLKQFYTNLVLIPSLLDYLQYIFLGLGILLIISAAVLMAMSQDHKNQQIIKVGRDLWK
SSSPFPPAQAGSPIAGCPGPCPDVS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcccggcgccgggtgtcgctggggctggggctggccggggcggcctgcgcc
ctcctggggctctgcctgctgctggtggggcccctcatcatcaaggagcaggtcatcaag
aatgtcaggattgaccccagcagcatctccttcagcatgtggaaagacatgcctgttcct
ttctacatgtcggtgtacttctttgaagtgctgaaccccaaggaggtcctccagggagca
aaaccgatgctgaaccagcgtggaccctacgtttacagagagttcaggtataaaacaaac
atcacattccatgacaatgacaccgtctcctacctggagtaccggaaactcttcttccag
ccggagttgtccaatggcagcgaagaagagtacatcgttgtgccaaacattatgatgatg
ggagcagctgtaatgatggaaaacctgccaaactttgtgaagcttttactgagtggagcc
ctggctggcctgaaacaggaggcgttcatgaaccggacagtaggggagatcatgtggggg
tatgaagaccctcttatagacacaataaatacgtttgttcctggcctgatcccattcaag
gggaaatttggcttattcatagattttaacaactccaattcaggactgttcactgtgaac
acgggtgtgaagaacatcagtagagttcacatggtggattcatggaatggactaaagaag
atgaactactggcggagcagcgagtgcaacatgatcaatgggactgcaggggagatgtgg
ccaccgttcatgtccccaacatcattggagttctacagccctgatgcctgcagatctatg
acactggtgtacgagcagtctgggaagttccagggtgtgcccatctatcgcttcgtggca
ccaaaaactctctttgccaatggcacggactatccacccaacgaaggcttctgtccctgt
atgcagtctggcatcctgaacgtcagtacctgtaggcaaaatgcaccgatgttcatttcc
catcctcacttctacaatgccgacccagccctggtgaacgctgtcaagggcctccacccc
agtaaggaccagcacggactcttcctcgatgtgcacccagtgacaggcatccccatgaat
tgctccgtcaagctccagctgaatttgtacatgaagcaggtgtctggtataattcaaacg
gggaagattaagccagtggtcctgccgctgctgtggtttgcagagagtggatccattgaa
ggcccagtcctaaagcagttttacaccaacctggtgctgatcccatccctgctggactac
ctccaatatatcttccttgggctgggtatcttgcttattatctcagcagctgtactcatg
gcaatgagtcaggatcacaaaaatcaacaaatcattaaggttggaagggacctctggaag
tcatctagtccattcccccctgctcaggcagggtcacctatagctggttgcccaggacca
tgtccagatgtctcttaa
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