Phalacrocorax aristotelis (European shag): 142064917
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Entry
142064917 CDS
T11493
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
parx03041
]
142064917 (TFIP11)
Spliceosome [BR:
parx03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
142064917 (TFIP11)
Other components
Complex C specific factors
142064917 (TFIP11)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
142064917
NCBI-ProteinID:
XP_074966571
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Position
15:7422552..7432307
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AA seq
827 aa
AA seq
DB search
MSMSHLYSTDGEDGVEMENFEVSDWDLQNEFNPHRQRHRQSKEEATYGVWAERDSEEERP
SFGGKRSRDYSAPVNFISAGLKKSAAEDVSEEDSDEDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGTKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTSQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRINKQLSAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDC
KPQGFALPELEHNLQLLIDITEQEIIQNDRQLQYERDMVVNLTHEIQKMSEVLSHEETAI
SNLSKVLEMVEECERRMQPSCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKDYFKNWDPLKDCSYGTEIIAKWKNLLENDQLLSHSGQDLTTDAFHRLMWEIWMPYVR
NIVAQWQPRNCGSMVDFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacagcacggatggggaggacggcgtggagatggagaacttc
gaggtgtcggactgggacctgcagaacgagttcaacccccaccggcagcgccaccggcag
agcaaggaggaggccacctacggcgtgtgggccgagcgcgattcggaggaggagaggccc
agcttcggcggcaagcgctccagggattactcagctcctgtgaacttcatcagcgccggg
ctgaaaaagtcagcggctgaggatgtgtcagaagaagactcagatgaagatgagaaacct
gttaagcaggaagaaatccctaaagagtttgtgccaaagaagttaaaaacgggtggtaat
ttcaagcctagtcagaaaggctttgtaggggggacaaagtcttttgtggattttggcagc
tgggagagacacactaagggaattgggcagaagcttctccagaagatgggttatgtccct
ggaagaggtctcgggaagaatgctcaaggtattatcaatccaattgaggccaaacaaaga
aaaggcaaaggagctgtgggggcatatggctctgaaagaaccagccagtctttgcaagat
tttcctgttgtggactcggaagaagaagctgaggaggaattccaaaaagagctcagtcag
tggcggaaggatcctaatggaggcaagaaaaagcccaaatacagctataagacagtagaa
gaactgaaagccaagggcaggatcaacaagcagctttcagcccctcagaaggagctgtct
caagtcaaggttatagacatgacgggccgggagcagaaggtttattacagctacagtcaa
attagtcacaagcacaatatcccagatgacagtcctcagcagccactgggcaaagactgc
aagccccaggggtttgccttgcctgagctggagcacaacctgcaacttctcattgacatc
acagagcaggagatcatccagaatgaccggcagctgcagtacgagagagacatggttgtc
aacctgacccatgagatacagaagatgtctgaagttctctcgcacgaggagacagcaatt
agcaacctcagcaaggtgctggagatggtggaagagtgtgagagacggatgcagcccagt
tgtgaaaaccccttaaccttggatgagtgtgcaaagatttttgagacacttcaggacaaa
tactatgaagagtacagaatgtctgatagggtagatctggcagtggcaatagtctatcct
ctcatgaaagattacttcaagaactgggatcccctcaaggactgttcatatggcacagag
atcatagccaagtggaagaaccttttggagaacgatcagctgttatcacacagtggccag
gacctgacaacagatgctttccacagactgatgtgggaaatctggatgccatatgtcaga
aacatagtggcgcagtggcaaccgcggaactgtggatcgatggtggatttcttggatagc
tgggtaaatgttgttcctgtctggatactggataacattctggatcagctcatcttcccc
aagctacagaaagaggtcgaaagctggaatcctttgacagacacggtcccaatccattca
tggatccacccctggcttcccctgatgcaggcacgattagagccgctgtattctcccatc
cgaaacaagctggcgaatgcactgcagaagtggcatcccagtgactcctctgccaaactt
attcttcagccctggaaggatgtgttcacacctgggtcatgggaggctttcatggtcaaa
aacattgtgcctaagctagggatgtgtttgaacgaactcatcataaaccctcaccagcag
cacatggatgccttctactgggtgattgactgggaggggatgatttctgtctccagtctt
gttgggctgctggagaaacacttcttcccaaagtggctgcaggtgctgtgctcttggctt
agtaacagccccaattatgaagagattacaaagtggtacttgggttggaagtccatgttc
tcagaccaagtgttagcgcatccatcgatcaaagacaaatttaatgaagctcttgatatc
atgaaccgggctgtctcttccagtgttggtgggtacatgcagcccggcgctcgagagaac
attgcctaccttactcacaccgaacggaggaaagacttccagtacgaagccatgcaggag
cgtcgcgaggctgagaacatggcccagcgcggcatcggcgtggccgccagctccgtgcca
atgaactttaaggacctcattcagacaaaagcagaggaacacaacattgttttcatgcct
gtgattggaaagcggcacgaaggaaaacagttgtatacgtttggacggattgtcatttac
attgacaggggtgttgtgtttgtacaaggagaaaagacttgggtgccaacctctctccag
agtctcatcgacatggctaagtga
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