Phalacrocorax aristotelis (European shag): 142064999
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Entry
142064999 CDS
T11493
Symbol
VPS33A
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04140
Autophagy - animal
parx04142
Lysosome biogenesis
parx04145
Phagocytosis
parx04148
Efferocytosis
parx05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
142064999 (VPS33A)
04142 Lysosome biogenesis
142064999 (VPS33A)
04140 Autophagy - animal
142064999 (VPS33A)
04148 Efferocytosis
142064999 (VPS33A)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
142064999 (VPS33A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142064999 (VPS33A)
Membrane trafficking [BR:
parx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
142064999 (VPS33A)
Hops complex
142064999 (VPS33A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
Motif
Other DBs
NCBI-GeneID:
142064999
NCBI-ProteinID:
XP_074966804
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All DBs
Position
15:9352069..9360726
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AA seq
601 aa
AA seq
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MAAHLSSGRVNLTALREAGRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKPGRLPQADVKNIIFFVRPKLELMAIITDNVLREDRGRSPQRDFHILFVPRRSL
LCEQWLKEQGVLGSFIHREQYSLDLIPFDGDLLSMESESAFKECYLESDQTSLYHAAKGL
MTLQALYGTIPQIFGKGECARHVANMMIRMKREFPGSQNSIFPVFDTLLLLDRNVDLLTP
LATQLTYEGLIDEIYGIQNTYVKLPPEKFAPKKQGEGGKDLPTEPKKLQLNSAEELYAEI
RDKNFNAVGSVLSKKAKIISAAFEERHHAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEDFFDNLTVEQEFMSGIDTDKVNNYIEDCIAQKHPLIKILRLVCLQSVCNSG
LKQKVLDHYKREILQTYGYEHILTLNNLEKAGLLKPQASGRNNYPTIRKTLRLWMDDVNE
QNPNDISYVYSGYAPLSVRLAQLLARPGWRSIEEVLKMLPGPHFEERQQLPTGLQKKRQH
GENRVTLVFFLGGVTYAEIAALRFLSQMEDGGTEYVIATTKLINGTSWIKSLMEKLEPAP
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacctcagctccgggcgcgtcaacctgacggcgctgcgggaggcggggcgc
agggagctccgcgagttcctcgacaagtgcgcggggtccaaggccatcgtgtgggacgag
tacctgacggggcccttcgggctgatcgcgcagtactccctgctcaaggaacatgaggtg
gaaaagatgttcacgctgaagccgggccgcctgccccaggcggacgtcaagaacatcatc
ttcttcgtcaggcccaagctggagctgatggccatcattacggacaacgtgctcagggaa
gacagaggccgttctccccagagggacttccacatcctcttcgtgccgcgccgcagcctg
ctgtgcgagcagtggctgaaggagcagggcgtgctggggtccttcatccaccgagagcag
tacagcctcgacttgataccctttgatggagacctgctctccatggagtccgagagcgca
ttcaaggaatgttatctggagagtgaccagacaagtctgtaccatgcggcgaaggggctg
atgacgctgcaggctctctatggaaccatcccacagatttttgggaagggtgaatgtgcc
cggcacgtggctaatatgatgatcaggatgaagcgtgagttccctggaagccagaactcg
atatttcccgtctttgataccctcttgttgctggaccgcaacgttgatctgctgacgcca
ttagctacacagctgacgtacgaagggctaatagatgaaatctatggaattcagaacact
tacgtgaaactccctcctgagaagtttgccccgaagaagcagggtgagggtgggaaagat
ctccccacagaacccaagaagctccagctgaactctgctgaagagctgtacgctgaaatc
cgagacaagaacttcaatgctgtggggtcagtgctgagcaagaaagccaagatcatctca
gcagcctttgaggaaagacaccacgcaaaaaccgttggagagattaagcagtttgtctca
cagttgccacacatgcaggcagcaaggagttccctagcaaaccacacctccattgcagaa
ctcatcaaagacatcaccacatctgaagatttctttgataatttaacagtggaacaagag
ttcatgtctggaatagacacagacaaggttaacaattacattgaagactgcatagctcaa
aaacatccattaatcaagattttacgtctcgtttgcttgcaatctgtatgtaatagcgga
ctgaagcagaaggttctggaccattacaaaagagagattctccagacttatggctatgaa
catatattgaccttaaacaacttagaaaaggctggactcctgaaacctcaggcaagtggt
aggaataactacccaacgatcaggaaaaccctgcgcttatggatggatgacgttaatgaa
cagaaccccaacgatatctcctacgtgtacagtggttacgctccgctgagcgtgcgcctg
gcacagctgctggcgcggccagggtggcgaagcatagaggaggttttaaagatgctgcca
ggtccccattttgaggagaggcaacagttacctactggccttcagaaaaagcgtcaacac
ggtgagaaccgagtcactctagtattcttcctgggaggcgtaacatacgcagaaattgct
gcactgagatttctgtcccaaatggaagatggaggcacagaatacgtcattgccactaca
aaactgatcaatggaacaagttggatcaaatccttgatggaaaaactggagcctgctcct
ttctag
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