Phalacrocorax aristotelis (European shag): 142065003
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Entry
142065003 CDS
T11493
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04142
Lysosome biogenesis
parx04144
Endocytosis
parx05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142065003 (CLTCL1)
04142 Lysosome biogenesis
142065003 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
142065003 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142065003 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
parx04147
]
142065003 (CLTCL1)
Membrane trafficking [BR:
parx04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
142065003 (CLTCL1)
Exosome [BR:
parx04147
]
Exosomal proteins
Proteins found in most exosomes
142065003 (CLTCL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
142065003
NCBI-ProteinID:
XP_074966809
LinkDB
All DBs
Position
15:17001754..17038941
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPDQGLQFSQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNRLLLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDKL
DASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTTPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgcccattcgcttccaggagcacttccagctccaaaatttgggcatt
aacccagcaaacattggattcagtaccctaacaatggaatctgacaagttcatctgcatc
agggagaaagtgggagagcaggcacaagtagtgataattgatatgagcgatccaacaaca
cccatcaggcgtccaatttctgccgaaagtgccatcatgaatccagcctctaaagtaatt
gcactaaaagctgggaaaacacttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccacacgatggcagaggaagtgatcttctggaaatggatatctgtgaatacagttgcc
ttggtgacagagacagcagtctaccactggagcatggagggagaatcgcaaccccagaag
atgtttgacaggcatgctagtcttgcgggctgccaaatcatcaattacagaacagatgaa
caccaaaaatggctgctgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctctactcagttgatagaaaagtctcccaacctatagagggccatgcagcagct
tttgcagaattcaaaatagagggaaatgccaaaccttctaccctcttctgttttgccgtg
aggagtcctgcagggggcaagctgcacataatcgaagtaggtcagccagctactggaaat
cagccatttgttaagaaagctgttgatgtgtttttcccacctgaggcacagacagacttt
cctgtggcaatgcagattggaatcaagcatggtgttatctacctgatcacaaagtatgga
tatattcacatgtatgacttggaatctggagtgtgcatctacatgaaccgtattagtgct
gatactatctttgtcacagctcctcatgaacctacctcaggcattattggtgtgaataaa
aaaggacaggtgctttctgtatgtgttgaggaagataacatagtgaactatgctacgaat
gttctccagaatcctgacctaggcctgcgtatggctatacgtagtaatctagctggggca
gaggaattatttgccagaaagttcaacacactgtttgctcaaggaagctacgcagatgct
gctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgatacaatcaggaag
ttccagagtgtaccagctcagcctgggcaggcctctcccctgctccagtactttggaata
ttgcttgaccagggacagctgaacaagtttgagtctctggagctctgtcgccctgtcctg
cagcagggccgtaaacagcttctggagaagtggctgaaggaagacaagctggagtgctca
gaggagctgggtgacttggtgaagacagctgacccaacccttgcgctcagtgtctatctt
cgtgccaatgtgccaaacaaagtgattcagtgctttgctgaaactggtcaattccagaaa
atagtactgtatgctaaaaaggttggctatacccctgactggatcttcttgctgagaagt
gtgatgagagtcagtccggatcaaggcctgcagttttctcagatgctggtacaggatgag
gagccactggctaacattaaccagattgtggatgtgttcatggagaacagtcttattcag
cagtgcacgtcctttctgttggatgccctgaaaaataaccgccccgcagaaggccacctt
cagactcgtctcctggaaatgaatttgattcatgccccacaggttgcagatgccattctt
ggaaaccaaatgtttacacactatgatcgtgctcatattgcccagttgtgtgaaaaggca
ggcttgctccagcgagctttggaacactacacggatctctatgatattaaacgtgctgtc
gttcatacgcacctcttgaatcctgagtggcttgtgaacttctttggctctctctcagtt
gaagactctgtggagtgtttgcgtgccatgctgtcagccaacattaggcaaaacctacag
ctctgtgtgcaagttgcttctaaataccatgagcagcttggtacccagtctcttgtggag
ctttttgaatctttcaagagctatgaaggactgttctatttcttgggttccattgtaaac
ttcagccaggatccagatgttcacttcaagtacatccaggcagcttgcaagactggtcag
ataaaggaagtggaaagaatctgccgtgaaagtaactgctacaacccagaacgggtgaag
aactttctgaaggaggcaaagctcacagaccagcttcctctgatcattgtctgtgatcga
tttgactttgtccatgacctggtgctctatttatatcgcaataacctgcagaagtatata
gagatctatgtacagaaggtgaatcctagccgcataccagcagtggttggaggacttctt
gatgtggattgttctgaagatgtcattaagaacctgatcatggtggttagaggccagttc
tcaacagatgagctggtggctgaagtggaaaaaagaaatcggcttaagttgctgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcgactcataatgccttggcc
aaaatctacattgacagtaataataatccagagcggttccttcgtgagaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgttgct
tatgagagggggcaatgtgatctggaactcataaaggtctgcaatgagaactctctgttc
aagagtgaggctcgctatctggtgcgcaggaaggaccctgagctctgggcaaatgttctg
gaagagaacaacccgttcaggcggcagcttattgaccaggttgtccaaacagctttatca
gagactcaggatccggaggaggtttctgtaactgtgaaagctttcatgactgctgacctg
cctaatgaattgattgagttattggaaaaaattgtcttggataattctgtattcagtgaa
cacaggaatctccagaatctgctgatcctgacggccattaaggctgaccgcactcgtgtg
atggagtacatcaatcggctggataactatgatgccccagatattgcaaacattgccatc
agtaatgagctatatgaagaagcctttgctatattcaggaaatttgacgttaatacttca
gcaattcaggtgctgattgagcacattgggaacttggaccgtgcttacgaatttgcagag
agatgtaacgaaccagcagtatggagccagctagccagagcacagctccagaaggacttg
gtgaaagaagccattgactcctatataaaggcagatgatccgtctgcctacatggaggtt
gttcaagcagctaatagaaatgataactgggaggacctagtcaagttcttacagatggcc
aggaagaaggctagagagtcttatgtagagacggaacttatttttgctttggcaaaaact
aatcgtctgtcagaactggaggagtttattagtggccctaataatgcccatatacaacag
gttggtgatcgctgttatgaagaggggatgtatgaagcagcaaaactactctataacaac
gtatctaactttgctcgcctggcatctaccttggtgcaccttggggagtatcaggcggca
gtggacagtggccgcaaagccaacagcacaaggacttggaaggaggtgtgcttcgcctgt
gtggatggaaaagaattccgcttggcacagatctgtggcttacacatagtcatccacgct
gatgaacttgaagagctgatcagttactatcaggatcgtggctactttgaagaactgatt
gcccttttggaagccgctttgggcctagagcgtgctcacatgggaatgtttactgaactt
gccatcttatactccaaattcaagcctcagaaaatgagggaacatctggagcttttctgg
tctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctctatgacaagtacgaggagtatgacaatgcaataattactatgatgaat
catcccactgatgcctggaaagaagggcagtttaaagacataattgccaaggtggccaat
gtggagctgtactacaaagccttgcagttctacttagactacaaacctctgctgatcaat
gatctcctgcttgtattatctccacgactggatcacaccaggaccgttaattttttctca
aaggttaataggctacttctagtaaagccttatctgcgttcagtccagaaccacaacaac
aaaggagttaatgaagctctaaacaaccttttaacagaggaggaagattaccagggtttg
agagcttccattgatgcctacgacaactttgataatataacattggctcagcgtctggaa
aagcatgaactaattgaatttaggcgtattgcagcatatttgtataagggtaacaaccgc
tggaaacagagtgtggagctatgcaagaaagaccgtctgtacaaggatgctatgcagtat
gctgcagagtccaaagatgcagaactagctgagaagctgcttcagtggttcctggaagaa
ggcaagcaggagtgctttgcagcctgccttttcacgtgttatgacttgctgcacccagat
gtagtccttgagttggcatggaggcataacatcatggactttgcaatgccttatttcatc
caagtgatgagagagtaccttaccaaagttgatgggctgttctataaggtggataaactt
gatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccactccaatagta
tttggccagcagttgatgttaacagcgggccccagcgcagtacctccccaggcaaacttc
ccatatggatacacaacaccaggattcacccagccgcctgtttatggttttaatatgtaa
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integrated database retrieval system
