Phalacrocorax aristotelis (European shag): 142065047
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Entry
142065047 CDS
T11493
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
142065047 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
parx01002
]
142065047 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142065047 (USP30)
04121 Ubiquitin system [BR:
parx04121
]
142065047 (USP30)
Enzymes [BR:
parx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
142065047 (USP30)
Peptidases and inhibitors [BR:
parx01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
142065047 (USP30)
Membrane trafficking [BR:
parx04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
142065047 (USP30)
Ubiquitin system [BR:
parx04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
142065047 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Spt20_SEP
DUF5700
Motif
Other DBs
NCBI-GeneID:
142065047
NCBI-ProteinID:
XP_074966882
LinkDB
All DBs
Position
15:complement(8245283..8259043)
Genome browser
AA seq
509 aa
AA seq
DB search
MLPGGEAEAGADGAVRRLLRAGAAARYKAMRNWGVIGGVAAALAAGMYVLWGPITERKRR
RKGLVPGLLNLGNTCFMNSLLQGLSSCPSFIKWLEEFTAQYKTDPNQPTEQQYLSLTLLH
LLKALSCQEVTEDDVLDASCLLEVLRTYRWQISSFEEQDAHELFHVLTSSLEDERDRQPR
VTHLFDVHSLEPEITQKQISCRTRGSLPPVSNHWKSQHPFHGRLTSNMVCKHCEHQSPVR
YDTFDSLSLSIPAAVWGRPMTLDHCLHHFISSESVKDVVCDNCTKIQAEGTVNGQSIENQ
RTTFVKQLKLGKLPQCLCIHLQRLSWSNQGTPLKRHEHVQFNEFLIMDIYKYRIPVHKSS
QKELNQKNSEETTPGTKDGIAVKPSDAEQPSGTKPLFMNGACSSSFLMSSGTFPLAIFPE
CSSPVYLYRLMAVVVHHGDMHSGHFVTYRRSPPSPKNSHSVSSQWLWISDDTVRKASLQE
VLSSSAYLLFYERVPSRVQHQSLELRAEE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccggtggcgaggcggaggcgggggcggacggggcggtgcggcggctgctgcgg
gccggggcggcggccaggtacaaagcgatgaggaactggggcgttatcggcggggtggcg
gcggcgctggcggcggggatgtacgtgctgtggggtcccatcaccgagaggaagcggcgg
aggaaagggcttgtacctggcctcctgaacttaggcaacacctgtttcatgaactccttg
ctgcaaggcttatcctcctgtccgtctttcatcaagtggctggaggaatttacagcacaa
tataagacagacccgaaccagcccactgagcagcaatacttgtccctgactttgctgcat
ctcctaaaagctttatcctgccaagaggtgacagaagatgatgtcctggatgcaagctgc
ctgttagaagttctaaggacgtacaggtggcagatctcatcgtttgaagagcaggatgct
catgaactgtttcatgtccttacctcttcattagaagacgaacgagatcgtcagcctcgt
gtgacacatttgttcgatgtgcactcgctggagccagaaataacccaaaagcaaataagc
tgcagaacaagagggtctcttccccctgtgtcaaatcactggaaatctcagcatcctttt
cacggaaggctgaccagcaacatggtttgcaaacactgtgaacaccagagtcctgtgagg
tatgatacctttgacagtctctcactgagtattccagcagctgtgtggggtcgtcctatg
acactagaccactgcctccatcatttcatctcctctgaatctgtaaaggatgttgtgtgt
gacaactgcactaaaattcaggcagaaggcactgtgaatggacagagcatagaaaaccag
agaacaacatttgttaagcagttaaaattaggaaagctccctcagtgtctttgcatccat
ctgcaaagactgagctggtcaaaccaaggcactcctctgaaacgtcatgaacatgtacag
ttcaatgagttcctgatcatggacatctacaaataccgcattcctgttcacaaatcaagc
cagaaggagctgaatcagaaaaactctgaagagacaacacctggaacaaaggatgggata
gcagtaaaaccttcagacgcagaacagccatctggtactaaaccgctcttcatgaatggt
gcctgctcgtcttcatttttaatgtcctcagggacttttccacttgctatattccctgaa
tgcagttcccctgtatacctttaccgtctgatggcagttgtagttcatcatggagacatg
cattctggacactttgtgacttaccgccgctctccaccttctcctaagaactcgcactct
gtcagcagccagtggctatggatttcagatgataccgttcgcaaagccagcttgcaggaa
gtcctttcttctagtgcttacttgcttttttatgagcgtgttccctcgagagtacagcac
caaagcttggaattgagggctgaagagtga
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