Phalacrocorax aristotelis (European shag): 142065297
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Entry
142065297 CDS
T11493
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142065297 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142065297 (NUP85)
03036 Chromosome and associated proteins [BR:
parx03036
]
142065297 (NUP85)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142065297 (NUP85)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
142065297 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
142065297
NCBI-ProteinID:
XP_074967390
LinkDB
All DBs
Position
16:complement(13910970..13924947)
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AA seq
677 aa
AA seq
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MEELEAEPALMVVPGADPSRRQLCFAWGPAEVLVCETLFGRRGGSRPGRGRDGTGRALLP
AALTGCLAGTGEAGPGSSRVFVVRRDQDIYIQTLRKLFNESHGIFIGLQRSEEELAGKSR
KAQLVQVSKNYRSVIRACMEDMHQAAVSARDPALQSQYSTQVSILSAMELIWNLCEILFV
EAAAAGPLLLRLLDWVRLHVCDVDNMVREVLSSENPSKHELFWNVVDVFVLQGRMDEARH
LLSKEASANPTSVNMYKILDDLMKKMPVPSLGNTQTLTEMELKWQHWHEECQRYLQDGTF
ASNSHMESICKILLGDEDAILEKKELMTTWYHFLVTRLLYSHPAVKPMELRFYAQSSMDL
FLGGESSPEPLDTILMAAFEFEMHQVIKECSIALSNWWFVAHLTDLLDHCKLLQSHNLYF
GSNMREFLLLEYASGLFSHHSLWQLAVDYFDHCPEYGRVYLELHIERIPLNTEQKALKVL
RICEQRQMHEQVRSICKIMAMKALRNNRLGSALSWSIRAKDAAFATLISDRFLKDYCERG
CFSDLDLIDNLGPSMLLSDRLTFLGKYREFHRLYGEKRFSEAAKLLLMLMTAHIAPCSFW
MTLLTDALPLLEQKEVIFSAEQTYELMRCLEDLTAGKSEKQKFQDDDVETTKVEILRLAL
ARNLARVIVKEGTLEGS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggaagctgagccagcgctgatggtggtgccgggcgcggacccttcccgc
cggcagctgtgcttcgcctggggccccgcggaggtgctggtgtgcgagaccctcttcggc
cgcagaggtgggtcccgtccggggcgggggagggacgggacgggccgggcgctcctgccc
gcggccctgacagggtgtcttgcaggcaccggggaggcggggcccggctcctcccgcgtc
ttcgtggtccgcagggatcaggacatctacatccagaccttgcggaaactcttcaacgag
tcgcacgggatcttcatcggcctccagcggagcgaggaggagctggcggggaagtcgagg
aaggcacaattggttcaagtgagtaaaaactaccggtcagtgataagagcatgtatggag
gacatgcaccaggcggctgtctctgcccgggaccctgccctgcagagccagtacagcact
caggtttctattctctctgcaatggagctgatctggaacctgtgtgagattctgtttgtt
gaagcagctgcagctggcccccttctgcttcgcctccttgactgggttcgacttcacgtc
tgtgatgtggacaacatggtccgtgaagttctgagcagtgaaaatccatcgaaacacgag
ctcttctggaatgtggtggatgtctttgtgctgcaaggccgaatggatgaagcacggcac
ttgctctccaaggaagccagcgccaatcccacgtcagtgaacatgtacaagatcttggat
gacttgatgaagaagatgcctgtgcccagtcttggcaacacccagacactgaccgagatg
gagctgaagtggcagcactggcatgaagaatgtcagcggtatctacaggatggaactttt
gcttccaattcccacatggaatccatctgcaagatcctgctgggagatgaggatgccata
ctggagaagaaggaactcatgactacttggtaccacttcctggttacccgactcctgtat
tcccatccagctgtgaagccaatggaactgcggttttatgcacagtctagtatggacctg
ttcctggggggagaaagcagccccgagcctctagacacgattttaatggcagcctttgaa
tttgagatgcaccaagtcatcaaggaatgcagcattgccctgagcaactggtggtttgtg
gctcacctgactgacctcctggatcactgtaaactcctgcaatctcacaacctctatttt
ggttcaaatatgcgtgaattccttctgctagagtatgcctcaggactcttctcccatcac
agcctgtggcagctggcggtagattactttgaccactgtccagaatacggcagggtatat
ctggagctccatatcgagcggatcccccttaacacagaacagaaggccctcaaagtgctg
aggatctgcgagcagagacagatgcacgaacaagttcgtagcatctgtaaaatcatggcc
atgaaagctctgcggaataatcgcttgggctctgccctgtcctggagcatcagagctaag
gatgcggcttttgctacactaatatccgatcgattcctgaaggactactgtgaaagggga
tgcttctctgacttggacctcatcgataatttggggccatccatgctgcttagtgaccgg
ctgacatttcttgggaagtaccgggaattccaccggctgtacggggagaagcggttctct
gaagctgccaagttgcttctgatgctgatgacggctcacatcgctccttgctccttctgg
atgaccctgctgacagacgccctgcccctgctggagcagaaagaggtcatattttcagca
gagcagacgtacgagttgatgcgatgcctggaagacctcacagcagggaagtcggagaag
cagaaattccaggatgacgacgttgagacaacgaaagtggaaattctgagacttgcgctc
gcacgaaatcttgcacgagtcatcgtcaaagaaggcacgttggaaggatcctga
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