Phalacrocorax aristotelis (European shag): 142065576
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Entry
142065576 CDS
T11493
Symbol
LAMC3
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04510
Focal adhesion
parx04512
ECM-receptor interaction
parx04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142065576 (LAMC3)
04518 Integrin signaling
142065576 (LAMC3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142065576 (LAMC3)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
142065576
NCBI-ProteinID:
XP_074967926
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All DBs
Position
17:7513030..7533792
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AA seq
1620 aa
AA seq
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MDLRARGGARQGDPSHPVPSHPVXAPATPSRGGSEPGQASPSMARPPGLCLLALLGLGLG
AGASPACWDPRGQPRRCMPVFENAAFGRVAQVTNTCGSPPEDYCLQMGTRHASTLCHRCD
ATDPQRHHNASFLTDFHSQEESTWWQSQSMAFGIQHPNSVNITLHLGKAYEITYVRLKFH
TSRPESFAIYKRSHAKGPWVPFQYYSASCEKTYGKQQRHYLRPGEDEQVAFCTDEFSDIS
PLSGGNVAFSTLEGRPSAYNFDGSPALQEWVTVTDLLISLNRLNTFGDDIFKDPKVLQSY
YYAISDFSVGGRCKCNGHASECAADEAGQLVCVCQHNTTGADCERCQPFYQDRPWARGTA
EAANECLPCNCSGRSDECFYDRELYRRSGHGGHCRNCRDNTAGPHCERCRRNHYRWEQQA
ACQPCHCHPAGSLQPQCDSSGTCLCKANVTGWKCERCKDGYHSLSEGGCRPCACNPAGSV
GTCDPNTGHCTCKESVEGHLCNRCRPGWFNLQPHNPAGCTSCFCYGHSTACTAADGYEVT
HVRSDFSQGLEGWAAAALGTTDLPLLWADGEIVTKWDGEELVDFLAPEKFLQNQRLSYGQ
LLSLLLGVEGNGTGMEAGVPLLRVQLVLVGEGMEITMPSSESHPQRGKQAVTFRLHEADG
AEPSLPAFSFQRLLSNLTALRLRVSRGPVQGRLSLSEVQLTSARPGPGPRAGWVEECTCP
LGYAGQFCQSCAPGFKREILFGGPFVSCVPCACNQHGDCHPLTGHCRCLHNTEGPSCERC
SPGFYGNPFVGRFDDCKLCPCPGHSPCTEVPGSGEVVCTHCPPGQRGKRCELCDDGFFGD
PLGQRGPVRPCIPCQCHGNVDLNAVGNCDPVSGRCLRCLYNTMGEHCERCQPGFYGDALA
PDPTGKCAPCDCNPNGSAPRLEGCDPRTGQCHCLPHVTGRACELCQPGYYGLQPAVGCKS
CECHSTGSRESGCHALTGQCSCQPGVTGKQCDRCRHGFFGFSARGCRACNCSPLGSVTPQ
CHENSTCICHPGFVGYKCDQCQANFFPDPLSSRCQQCPACYGLVKDEADRLKARLQEVEE
WLQKPVCYARLDQSLMLGDTARGDGLPSPHLLQGAWAALSAQVGQLAGVLGTARGRLSNA
SQATGCSGHGPPKTCILLSEIGAMLQSAQREILHAADTLATTEMPQEIPQQPTNWSRQAL
EARELAKSHKDAAVQVEAVVGRALHASNTSLELLRSLLEGNTTQEVQRELKARYEEIQRA
REELDTGVAEVAVEARRAFAAVQQVNADMAEQILQVAALGQALPAQAGALAQDLAALERA
VEAQEPSAWQAVDASRALAARLRQELQRTRSFKQLRDRAGSAHGTATSAVSHGKAVLSDA
ESLLASLEGMRKVLGHRKGQATLSRRMTLVRDRAVVEAQRKIKQAEKMLGNSLSISTTAR
RIAGEAEQVSGETAKRAQAVLGESKQARKHTSRLATRANETQRELSWQERVAEKLRGDLK
EAHQVGMEVSEMAKSLQEARGSLMSDIETLNDLLSSLGNLEQPAQVERLLSTGRLQLEQL
WLRLAGPDALGGQLSLLQQEAVRQQEKIQAFESDLAEIRADKKNLEDILRSLPEGCSKWQ
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggacctcagagcgagaggaggtgccaggcagggggacccgtcccatcctgtcccatcc
caccccgttgctcccgccacgccgtccagaggaggctcagagcccggccaggcgagcccc
agcatggcacggcctccggggctctgcctgctggccctgctggggctggggctgggggca
ggggcctcgcctgcctgctgggacccccgtggccagccccgccgctgcatgcccgtcttt
gaaaatgccgccttcggccgggtcgcccaggtcaccaacacatgcggttctccgcctgag
gactactgcctgcagatgggcacccgccacgccagcaccctgtgccaccgctgcgatgcc
accgacccccagcgccaccacaacgcctccttcctcaccgacttccacagccaggaggag
agcacctggtggcagagccagtccatggccttcggcatccagcaccccaactccgtcaac
atcactctccacctgggcaaagcctacgagatcacctacgtgcggctgaagtttcacacc
agtcgccccgagagctttgccatctacaagcgcagccacgccaaggggccctgggtgccc
ttccagtactacagtgcgtcctgcgagaagacctacgggaagcagcagcggcactacctg
cggccaggagaggatgagcaagtggccttctgcaccgacgagttcagtgacatctccccg
ctgagtgggggcaacgtagccttctccaccctcgagggacggcccagtgcctacaatttc
gatgggagccctgcgctgcaggaatgggtgaccgtcactgacctgctcatctccttgaac
cggctcaacacgttcggggatgacatcttcaaggaccccaaggtgctgcagtcgtactac
tacgccatctctgacttctctgtcggtggcaggtgcaaatgcaatggccacgccagcgag
tgcgcggcggacgaggccgggcagctggtctgcgtgtgccagcacaacacgaccggcgcc
gactgcgagcgctgccagcccttctaccaggaccggccctgggctcgcggcactgccgag
gccgccaacgagtgtctcccttgcaactgcagcggccgctccgacgagtgcttctacgac
cgggagctgtaccgccgcagcgggcacgggggccactgccgtaactgccgcgacaacacg
gccgggccccactgtgagcgctgccggcggaaccactaccgctgggagcagcaggcagcc
tgccagccctgccactgccaccccgcaggctccctgcagccccagtgcgacagctcgggg
acctgcctctgcaaagccaacgtgacgggctggaagtgcgagcgctgtaaggacggctac
cacagcctcagcgaaggcggctgcagaccctgtgcctgcaaccccgcgggcagcgtgggc
acctgcgaccccaacacggggcattgcacctgcaaggagagcgtggaggggcacttgtgc
aacaggtgccggccaggctggtttaacctgcagccccacaaccctgctggctgcaccagc
tgcttctgctacggccactccactgcctgcacggcggcagatggctacgaggtgacccat
gtccgctccgacttcagccaagggctggagggctgggccgctgcagctctgggcaccacg
gacctgcctctgctttgggctgacggagagattgtcaccaagtgggacggagaggagctg
gtggattttcttgcaccagagaagtttctgcagaaccagcgtctcagttatgggcagctc
ctgtccctgctgctgggagtggaggggaatgggactgggatggaggctggggtgcccctg
ctccgggtccagctggtgctggtgggtgaggggatggagatcaccatgcccagcagtgag
agccatccccagcgtggaaagcaggctgtcactttcaggctgcatgaggcagatggtgct
gagccttcgctgccggccttcagcttccagcgcctgctctccaacctgaccgccctccgc
ctccgcgtgagccgcggccccgtgcaaggcaggctgtccctgagcgaggtccagctcacg
tccgctcgccctgggccagggccgcgggcgggctgggtggaagagtgtacgtgtcccctg
ggctatgccgggcagttctgccagtcctgtgcacccggcttcaagcgggagatcctcttc
ggtggccccttcgtcagctgcgtgccctgtgcctgcaaccagcacggggactgccacccc
ctcacagggcactgccggtgcttgcacaatacagaaggtccctcctgcgagcgttgcagc
cctgggttttacggcaacccctttgtagggcgctttgatgactgcaagctgtgcccctgt
cccggccactcaccctgcaccgaggtgcctggcagtggagaggtggtctgcacccactgc
ccccctggacagagaggaaaacgctgtgagctctgtgatgatgggttttttggggacccc
ctggggcagaggggccccgtgcgcccctgcatcccctgccagtgtcacgggaacgtggac
ctcaacgctgtggggaactgtgaccccgtgtctggccggtgcctgcgctgcctgtacaac
acgatgggcgagcactgtgagaggtgtcagccgggcttctatggggatgcgctggctccc
gaccccaccgggaagtgtgcaccttgtgattgcaaccccaacggctcagccccgaggctg
gagggctgtgatccacgcacgggccagtgccactgcctcccacatgtgacgggcagagcc
tgtgaactctgccagcctggctactatggcctgcagcctgctgtggggtgcaagagctgt
gagtgccactcgacggggtcacgggagagtgggtgccacgcgctgacggggcagtgctcc
tgccagccgggtgtcacagggaagcaatgcgaccgatgccgccatggcttcttcggcttc
tcggccaggggctgccgagcctgcaactgctccccgctgggctccgtcaccccacagtgc
cacgagaacagcacctgcatctgccaccccggcttcgtgggctacaagtgtgaccagtgc
caggccaacttcttccctgacccactgagctcccgctgccagcagtgtcctgcctgctat
gggctggtgaaggacgaggctgaccggctgaaggccaggctgcaggaggtggaggaatgg
ctgcaaaaaccagtctgctatgcccgcctggaccagtccctcatgctgggagacacagcc
cggggagatgggctgcccagccctcacctccttcaaggtgcctgggctgccctctcggcg
caggtggggcagctggcaggggtgctgggcactgcacggggccgtctcagcaacgccagc
caggccaccggctgttccggccatggaccccccaagacctgcatcctgttgtcagagatc
ggggccatgctacagtcagcacagcgggagatcctgcacgctgcggacaccctggctacc
acggagatgccccaggaaatccctcagcagcccacaaactggagccgccaggcactggag
gcgcgggagctggccaagagccacaaggatgccgcagttcaggtggaggcggtggttggg
agagcactgcacgcctccaacaccagcttggagctcctgcggagcctgttggaggggaac
acaacacaggaggtgcagcgtgagctgaaggccaggtatgaggaaatccagcgggcacgg
gaggagctggacactggtgtggcggaggtggcagtggaggccaggagggctttcgcagcc
gtgcagcaagtgaacgcagacatggccgagcaaattctgcaggtggctgcactggggcag
gcactgccggcgcaggctggagccctggcacaggacctggcagcgctggagcgggcagtg
gaggcacaggagccatcagcttggcaggccgtcgacgcgtcccgcgctctggcagccaga
ttgcgccaggagctgcagaggactcgcagcttcaagcagctgcgggaccgggctggctct
gcccacggcacggccacctcagctgtctcacatggaaaagccgtgctctctgatgcggag
tccctcctggcaagcttggaaggcatgaggaaggtgctggggcatcggaagggccaggct
accctgagcaggaggatgacacttgtgcgggacagggcggtggtagaggcccagaggaag
attaaacaggcagagaagatgctgggaaactcattgtccatctccaccacagcccggagg
atagctggggaggctgagcaagtctctggggagactgccaagagggcacaggctgtgctg
ggggagagcaagcaggcccgcaagcacaccagccggcttgccacgcgtgccaatgagacc
cagcgggagctctcctggcaggagcgtgtggctgagaagctcaggggggacctgaaggaa
gcacaccaggtggggatggaggtgagtgagatggcaaaaagtctccaggaagcccggggc
tcactcatgtcagacatcgagaccctgaacgacctgctgagcagcctaggaaacctggaa
cagcctgcgcaggtggagaggctgctgagcaccgggcggctgcagctggagcagctgtgg
ctgcgcctggccgggccggatgccctgggcggacagctcagcctgctgcagcaggaggcg
gtgcggcagcaggagaagatccaggcttttgagagcgacttggccgagatccgggccgac
aagaagaacctggaggacattttgcggagcctccccgagggctgctcgaagtggcagtga
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