Phalacrocorax aristotelis (European shag): 142065760
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Entry
142065760 CDS
T11493
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
parx
Phalacrocorax aristotelis (European shag)
Pathway
parx04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
142065760 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_5
Ank_3
Ank_4
EGF_3
Gurken_M
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
142065760
NCBI-ProteinID:
XP_074968429
LinkDB
All DBs
Position
17:9848928..9892372
Genome browser
AA seq
2548 aa
AA seq
DB search
MERLLAPGLLVLLLPALTRGLRCTQLAESCLNGGKCETFLNGTEVCQCSSAHVGERCQLP
NPCLSSPCKNAGTCTPVVRGSTVDYTCTCRLGFTDELCLTPRDNVCLSNPCRNGGTCDLL
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYICRCTAGFHGANCKQDVN
ECNTSPPICKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQIGDTT
YDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNSHGGYNCVCVNGWTGEDCSENIDDCATAACFHGATCHDRVASFYCE
CPHGHTGLLCHLDDACISNPCNEGSNCDTNPINGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFSGTHCEIDIDECDPDPCHYGTCKDSIAAFICLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCLCLKGTTGPNCEINLDDCASNPCDYGKCIDKIN
GYECTCEPGYTGHMCNINIDECSSNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGKCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCKDVLAPCAGGPCKN
GGECRESEDYKSFSCSCPSGWQGQMCEIDINECVKSPCRNGAICQNTNGSYHCACRTGFT
GRNCDTDIDDCKPNPCHNGGSCSDGIGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNSGTCVDGINTFTCICPPGFTGSYCEH
DINECDSKPCLNGGMCQDSYGAYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCTPAFTG
PECQYPASSPCTSNPCYNGGTCEFFSDASPYYQCHCPANFNGLNCHILDFDFQGGIGQDI
IPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPDNLKNNSFNFLRELSRVLHTNVVFKKDPKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMSSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTKNSQLYPMYVVV
PLVLLAFIGVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNASD
GTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAPT
PPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASLH
NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI
RNRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNNV
EAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIA
QERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPSGYIGNLKPAVQGKKARKPS
TKGLSCNGKDAKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTSP
FQQSPSMPLNHLPGMPDAHMSINHLNMAGKQDMAMGNSSRMAFDSVPPRLSHLPVSSPST
VMSNTPMNFSVGGAAGLNGQCDWLTRLQNGMVQNQYNPMRGNMQPGAHQQTQNLQHGMMT
SLHNGLPTTSLSQMMSYQAMPNTRLASQPHLMQSQQLQQMQQQQLQQQNMQPQQQPQQPQ
QQPPQQPPQQHHNPSSNASGHIGQNFLGTELSQPDMQPASSSTMAVHTILPQDSQMLPTS
LPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPHS
NVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctcctggcgcccggcctcctggtgctccttctgcccgccctgacgcgaggt
ttacggtgcacgcagcttgccgaatcctgcctcaacgggggcaagtgcgaaacttttctc
aacgggacggaggtgtgccagtgtagcagtgcccacgtgggtgagcggtgccagctgccc
aacccctgcctcagctccccctgcaagaacgccggcacctgcaccccggtggtgcgcggc
agcaccgtggactacacctgcacctgccgcctgggcttcactgacgagctctgcctgaca
ccccgcgacaacgtctgcctcagcaacccctgccgcaatgggggcacctgcgacctgctg
acgctcagcgagtacaagtgccgctgcccgccggggtggtcaggcaaaacctgccagcag
gccgacccctgtgcctccaacccctgtgccaacgggggccagtgcgtccccttcgaagcc
cactacatctgccggtgcactgccggcttccacggggccaactgcaagcaggacgtgaac
gagtgcaacacctcgccacccatctgcaagaacggcgggagctgcaccaacgaggtgggc
acctaccagtgctcctgcaagccagcgtacaccgggcagaactgcgagcacctctacgtg
ccctgcaacccctcgccctgccagaacggggggacgtgccgccagatcggagacaccacc
tacgactgcacgtgtctgccagggttcacgggccagaactgtgaggagaacatcaatgac
tgcccgggcaacaactgcaagaatgggggcacctgcgtggatggcgtcaacacctacaac
tgccagtgcccgcccgagtggacaggtcagtactgcaccgaagatgtggacgagtgccag
ctgatgcccaacgcctgccagaacgggggcacctgccacaacagccatggtggctacaac
tgcgtctgcgtcaacggctggacaggcgaggactgcagcgagaacatcgatgactgtgcc
acggctgcctgcttccacggggccacctgccacgaccgggtagcctctttctactgcgag
tgcccccacggccacacaggtttgctgtgccacctcgatgacgcctgcatcagcaatccc
tgcaacgagggctccaactgcgacaccaaccccatcaatggcaaagccatctgcacgtgt
ccttcggggtacatgggaccggcctgcaaccaggacgtggacgagtgctcgctgggagcc
aacccttgtgagcacgcagggaaatgcatcaacacccaggggtccttccagtgccagtgc
ctgcagggctactcaggccctcgctgtgagattgacgtcaatgagtgcctctccaacccc
tgccagaatgacgccacctgcctggaccagatcggagagttccagtgcatctgcatgccc
ggttacgagggggtttactgcgagatcaacacggacgagtgcgccagcagcccatgcctg
cacaacggcaactgccttgacaagatcaacgagttccactgcgagtgccccaccggcttc
aacgggcacctgtgccagttcgacattgacgagtgcgccagcaccccctgcaagaacggc
gccaagtgcgtggacggccccaacacctacagctgcgagtgcaccgaaggtttctcgggc
actcactgtgagattgacatcgatgagtgtgaccccgacccgtgccactatgggacctgc
aaggacagcatcgccgccttcatctgcctctgccagcccggctacacaggccaccgctgc
gacatcaacatcaatgagtgccagagccagccctgcaaaaacggggggacctgccaggac
aggaacaacgcctacaactgcctctgcctcaaagggaccacggggcccaactgcgagatc
aacctggacgactgcgccagcaacccttgcgactacggcaagtgcatcgacaagatcaat
ggctacgagtgcacctgcgagccaggttacacagggcacatgtgcaacatcaacatcgac
gagtgctccagcaacccctgccacaatgggggcacatgcaaggatggcatcaatggcttc
acctgcctctgccctgagggtttccacgaccccaagtgcctgtccgaagtgaacgagtgc
aacagcaacccctgcatccacgggaaatgccacgacgggctgaatggctacaggtgtgac
tgtgacccagggtggagtgggacaaactgcgacattaacaataacgagtgcgagtccaat
ccctgtgtgaacggtggcacctgcaaggacatgaccagcggctacatctgcacctgcagg
gagggattcagcggacccaactgccagaccaatatcaacgaatgcgcttccaacccctgc
ctgaaccagggcacatgcatcgacgacgtcgctggctatacctgcaactgcctcctgccc
tatacaggagccacctgcaaggatgtgctggccccctgcgctggtggcccctgcaagaat
ggtggcgagtgccgggagtcagaggactacaagagcttctcctgcagttgcccatctggc
tggcaaggtcagatgtgcgagattgacatcaacgagtgcgtgaagagcccctgccgcaac
ggggccatatgccagaacaccaacgggagctaccactgcgcctgcaggaccggcttcacc
ggccgcaactgcgacactgacattgacgactgcaagcccaatccatgccacaatggtggc
tcctgctccgatggcatcggcacgttcttctgcgagtgcctggctggtttccgtgggccc
aagtgcgaggaggatatcaatgagtgtgccagcaacccctgcaagaacggcgccaactgc
accgactgcgtcaacagttacacctgcacctgcccctctggcttcagtggcatccactgc
gagaacaacacgcctgactgcacagagagctcctgcttcaacagtgggacctgcgtggat
ggcatcaataccttcacctgcatctgtccacccggcttcacaggcagctactgcgagcat
gacattaacgagtgcgactccaagccgtgcctgaacgggggcatgtgccaggacagctac
ggggcgtacaagtgcacttgtccccagggatacaccgggctcaactgccagaacctggtg
cgttggtgcgactcctctccctgcaaaaatggaggcaagtgctggcagaccaacaacctg
taccgctgcgagtgcaacagcggatggacagggctctactgcgatgtccccagtgtctcc
tgcgaggtggctgctaagcagcaaggtatcgacgtagcacatctctgcaggaattcgggg
ctctgtgtggacactggcaacactcacttctgccgctgccaggccggctacactggcagc
tactgcgaggagcaggtggacgagtgctcccccaacccctgccagaacggagccacctgc
acggactacctgggaggctactcctgtgagtgtgtggctggttatcatggagttaactgc
tcagaggaaatcaatgagtgcttgtcccacccatgccagaatggaggaacctgcatcgat
ctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtacactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccctgggccccaagtgctttaac
aatggcaagtgcacggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagacgtcaacgagtgcctgtccaacccctgcgatgcccgcggc
acccagaactgcgtgcagcgggtcaatgactacaaatgcgagtgccgacctggctatgca
ggccgtcgctgtgacactgtggtggacggctgtaaaggcaaaccctgcaggaacggtgga
acgtgcgcggttgccagcaacactggccgtggcttcatctgcaaatgccccccgggattc
gtgggtgccacctgcgagaacgactcccgcacctgtgggaacctgcactgcctgaatggt
ggcacctgcatctccatccacaagagctccaagtgcatgtgtacaccggccttcacgggt
cccgagtgccagtacccggccagcagcccctgcacatccaacccctgctacaacgggggc
acctgcgagttcttcagcgatgcctccccctactaccagtgccactgccctgctaacttc
aacggcctcaactgccacatcctcgacttcgatttccaaggtgggatcgggcaggatatc
atcccacccaaaattgaggagaagtgtgagattgcagtttgtgcggggtatgccggcaac
aagatctgcgatgggaaatgcaataaccatgcctgcggctgggatgggggtgactgctcc
ctcaatttcaacgacccctggaagaactgctcccagtcgctgcagtgctggaagtacttc
aacgatggcaagtgcgactctcagtgcaataacgcgggctgcctgtacgatggatttgac
tgccagaaatatgaagggcagtgcaaccctctctatgatcagtactgcaaagatcacttc
tcagatggtcactgtgaccagggctgtaataattttgagtgtgaatgggatggtctggac
tgtgcaaacaacatgccagagaagcttgcggatggcacgctggtggtggtggtcctgatc
actcctgacaacctgaagaacaactctttcaacttcctgcgggagctgagccgtgtgctg
cacaccaacgtggtcttcaagaaggaccccaagggagagtatatgatctttccatactac
ggcaatgaggaggagctgaaaaaacattacatcaagaggtcaacagaggactggtcagat
atgtctagtgctgtcatcaacaaagtgaagagcagcctctactccagggctggcagaagg
cagaagagagagctcgatcagatggacatcagaggatccatcgtctacttggaaattgat
aaccgccagtgcatccagtcatcttcccagtgcttccagagtgcaaccgatgtggcggca
ttcctgggagccttggcctcccttggcaacctgaacataccctacaaaatagaagccgtt
aaaagtgaaacagctgagcccacgaagaactcgcagctgtatcctatgtacgtggtggtg
cctttggtcttgcttgctttcatcggagtgggagtactggtgtctcgtaagcggcgcagg
gagcatgggcagctttggttcccagaaggcttcaaagtgacagagtcgagcaagaagaag
cgacgagaaccacttggggaggattctgttggactgaaaccactcaaaaatgcttctgac
ggcacactgatggatgacaaccaaaatgagtggggtgatgaggagaccttggacaccaag
aagtttaggttcgaggagcaggcgatgctgcctgacacggacgaccagacggaccacagg
cagtggacccagcagcacctggatgctgctgacctgcgcatatcctccatggcacctact
ccaccgcagggggaaatcgatgcagactgtatggatgtcaacgtcagaggtcctgatggc
ttcacccccctcatgatcgcctcatgcagtggaggagggctggagaccggcaatagcgaa
gaggaagacgatgctcccgctgtcatttcggatttcatctaccaaggcgccagcttacac
aaccagactgaccgcaccggcgagacagcgcttcacctggctgcccggtactcccgctcg
gacgctgccaagcgcctgctggaagctagtgccgatgcaaacatccaagataacatgggc
aggacgcccctccacgccgccgtctctgccgatgcccagggagtcttccagatcctgatt
aggaacagggcaaccgatcttgacgcccgaatgcacgacgggaccactcctctgatcttg
gccgctcgcttggctgtggagggcatgctggacgatctcatcaactgccatgcagatgtc
aacgctgtggatgatctaggcaagtcggcactgcactgggcagctgctgtgaataacgtt
gaagccgcagtcgtcctcctgaagaatggtgccaataaggacatgcagaacaataaggag
gagaccccactcttcctcgcagccagagaagggagctatgaaaccgccaaggtcttgctg
gaccattttgcaaaccgcgacatcacggaccacatggaccgtctcccacgggacatcgcc
caggagcggatgcaccacgacatcgtgaggctgctggacgagtacaatctggttcggagc
ccaccgctgcacaacggcccgttgggggcacccacgctgtccccaccactctgctctccc
agcggctacatcggcaacctgaaacctgctgtccagggcaagaaggccaggaagccgagt
accaagggcctgagctgcaacggcaaggatgccaaagatctcaaagctaggaggaaaaaa
tcacaagatggaaaaggatgtctgcttgacaactccagtgtgttgtctccggtggattcc
ctggagtcaccccatgggtacctgtcagatgttgcctctcctccgctgatgacctctcca
tttcagcagtccccttccatgcctctgaatcatctgccaggcatgcctgacgcccacatg
agcatcaatcacctcaacatggcagggaagcaggatatggccatgggaaactccagcagg
atggccttcgattcggtgccaccacgtctctctcacctccccgtctccagccccagcaca
gtgatgagcaacaccccgatgaatttctccgtgggtggagcggccggtctgaacgggcag
tgtgactggctcaccaggctgcagaacggcatggtccagaatcagtacaacccgatgaga
ggcaacatgcaaccaggggcgcatcagcagacgcagaaccttcaacacggcatgatgacc
tccctgcacaacggcttgcccaccacaagcttgtcgcagatgatgagctaccaggccatg
cccaacacccggctggcttcccagcctcatctgatgcagagccagcagctacagcagatg
cagcagcaacagctccagcagcagaacatgcagccgcagcagcagccgcagcaaccccag
cagcagccgccgcagcagccgccgcagcagcatcacaaccccagctccaacgcgagcggc
cacatcggccaaaatttccttggtaccgagctgagccagcccgacatgcagccggcaagc
agcagtaccatggcagtccacacgatcctgcctcaagattcccagatgctgcccacgtct
ctgccatcctccctcgcccagcccatgaccaccacgcagtttctaactccaccttcccag
cacagttattcctcccccttggacaacacccccagccaccagctccaggtgcctgaccac
cctttcctaacgccgtctccggagtcaccggaccagtggtccagctcgtctcctcactcc
aacgtgtccgactggtccgagggcatttccagccctcccacgagtatgcagtcacagatg
ggacacatccccgaagccttcaagtaa
DBGET
integrated database retrieval system
