Phalacrocorax aristotelis (European shag): 142065762
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Entry
142065762 CDS
T11493
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
parx03000
]
142065762 (SNAPC4)
03021 Transcription machinery [BR:
parx03021
]
142065762 (SNAPC4)
Transcription factors [BR:
parx03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
142065762 (SNAPC4)
Transcription machinery [BR:
parx03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
142065762 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
SANT_DAMP1_like
SLIDE
Myb_DNA-binding_2
Motif
Other DBs
NCBI-GeneID:
142065762
NCBI-ProteinID:
XP_074968442
LinkDB
All DBs
Position
17:9954957..9974232
Genome browser
AA seq
1562 aa
AA seq
DB search
MSRWPGPAGPRRAGAALSPAGLDLDAERERIRREIEELERSLEPGGAGIETAVSDASLSS
GTDDGEDDDSDSRDEMEMEIEDDSSDDDIESSLPQDPETCLQMNHVYQEVIQEKIEEVEL
LIAQNKEQQKEIMCELGGPKIAKAGDGRNLPTNIFLGHFMKPYFKDKTTGIGPPSNEDTK
EKAAQGIKSFEQLLSKKWKSREKTLLQKSVASDRLQRLLQPKLLKMSYWNQKLEKVKTEM
EKQILEKQIKELEQEIEAINQLPESDLLGNRFDEHDWEKISNVHFDGQRSSEELRKFWQN
WEHPSINKKEWTEEEIERLKTIAAKHGYLDWQTIAQELGTNRTPFQCLQKYQVYNKDLKR
KEWTKDEDQMLLELVQEMRVGSHIPYKKIAYYMEGRDSAQLIYRWTKSVDPSLKKGPWTP
EEDTMLLAAVKKYGERDWYKIRTEVPGRSDAQCRDRYLKALHCDVKKGKWSLEEEEQLIE
LVQKHGLGHWSKIASELPHRTGSQCLSKWKLMIGSKKRSRPTKRRHVQESSSSSESSSED
IELDFADSSEEETTSKEERVFPSIDLWIPTRTNMKEPNEGRYQTPSLFSPASADAKTGSS
EVPSAASELNTLLRGIARPHSTDIVVKNPVEVMNKASRCGKQVLQVTLENVRRVLRNNTC
FQRRLQSKILKPSATVLTKVSGVGTSVGQKLQGLQNITEKTYRQERERLRRMNLDRKLLM
AVTPWVGNVLLPCTLQTGKMAFHQTKADSIQEKIKSVSLASTPLFTLFIQLFQIDTNGCM
KIIRERRLRQSELLGANARRPQQASQNTETSSGSSSQPCTQRNSRRGIPRNAVRRPVALK
ARETSAALQSSAPAVQGAPPAQVQRQKPKTVSELLREKRLRESRAKKAMQRTVFVAPQVL
VSGPLIIQHPPQRIIPSAQAGSKPAAVGCTNSEVQCAPAPLPAFTSVAGSTSAAVLENHS
SSVPETRESPGSSQGTELQSSKELKEQALESSSEGGFFPGTNPAAAEQAPHQGGCNGQVV
AGSSASVVLQNQAFVPHQITVVPVGIESGTNKLSLSTPVTCDLNSNGSQQRPVNLLPALV
TPQTGSHLIPSSILPFAWVVTPQALLPTAVQTVVGVPQGLPAAAVRSQCPTTVTSDGNVS
GLGVPPVPAGANTPHPISAETKAPSAQLAEGVPLGKTANHSTVLLPVTSASPGCTTSSAA
PACSGGFSKASDPSAAQSAPPPDAPALHAVLLPQTQLPASTQGSDSQCVSSLTSLGKSHD
ATTTSGSSSNASVVVKGTVLQPGDPVPHNNVPRNSDCFAAQALKNRPIAAKPPTAQPADS
PPQPATSSAEKNQLDFSLISLEDEGLVKEWLTGKQGVRVPSLQTRLPYLPPFLCNLKTLS
KLLLQKAALEEQAACLLPSDANQDEGTGVDLHAIRELVQQKLGDNPAYLLLKARFLAAFT
LPAVLATLPPPKVTTTLSASRKQYEESDEEEWQSEEDVSEEESCGNELTGVRLDWTVGDE
PGDKDADLLNQGMGAEENAAQSVLDSCTDVADASAPQIRRSARFRKRRRMSHWNEVCLPT
WQ
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctggccgggcccggctgggccccgccgcgccggggccgcgctgtcccccgcg
ggcctcgacctggacgcggagcgggagcggatccggcgggagatcgaggagctggagcgg
agcctggagcccggcggggccggcatcgagacggccgtgtccgacgccagcctcagctcc
ggcacggatgatggtgaagatgatgactcggattctcgtgatgaaatggaaatggaaata
gaagatgacagtagtgatgatgacattgaaagtagtctgccacaggatccagaaacgtgt
ctgcagatgaaccatgtgtaccaggaagttatccaggagaagattgaggaagtcgagctt
ctcattgcacaaaacaaagaacagcagaaggaaatcatgtgcgagcttggtggtccaaaa
atagcaaaggcaggagatggtagaaatctaccaacaaacatatttttgggtcattttatg
aagccatactttaaggataaaacgacaggaattggccctccttccaacgaagacaccaag
gaaaaggcagctcagggcataaaatcctttgaacaactgctttcaaaaaaatggaaaagc
agagagaagacattattgcagaaatcagtagcaagtgaccgcttgcagcgcctgcttcag
ccgaagttactgaagatgagttattggaaccagaaactggagaaagtcaagactgaaatg
gagaaacagatcttggaaaagcaaatcaaagaactggagcaagaaatagaggcaattaac
caactcccggaaagtgacctgttagggaacagattcgatgagcacgactgggagaaaatt
tcaaatgtccactttgatggacaacgtagttcagaagaactgaggaagttttggcaaaat
tgggaacatccaagcatcaacaaaaaggaatggactgaggaggaaatagagaggctaaag
acaatagctgctaaacacggttatctggactggcagactatagcccaggagttggggaca
aacaggacacctttccagtgcttgcagaagtatcaagtctataacaaagatttgaaaagg
aaagaatggaccaaagatgaagatcagatgcttttggagcttgttcaggagatgagagta
ggaagtcatattccatacaagaaaattgcttattacatggaaggaagagattctgctcag
ctgatttaccgatggacaaagagcgtggaccccagtttgaagaaaggaccctggacacca
gaggaagacactatgctgttggctgcagttaagaagtatggagagcgtgactggtataaa
attcggacagaagtgccagggaggagcgatgctcagtgcagagaccggtacttaaaagca
ttgcactgtgatgtaaagaaaggcaagtggagtttagaggaagaagagcagctaattgaa
ctggttcaaaagcatggcctgggtcactggagtaaaatagcttctgaattgccccatcgg
actggctcccaatgtctaagcaagtggaagctcatgattgggtcgaagaaaagatctagg
ccaacaaaacgccgacatgtgcaagagagttctagctcttcagagagtagcagtgaagac
atagaactggatttcgcagacagttcagaggaggagacaacgagcaaggaggaacgtgta
tttcccagcattgatttgtggataccaacacggacaaatatgaaggagccaaatgaagga
cgataccaaactccatcccttttctctcctgcgagtgctgatgcaaagaccggtagcagt
gaagttccaagtgcagcgtcggagttgaacaccctcctgaggggcattgcacgtccgcat
tcaacagacatcgttgtgaagaatccagtagaagtaatgaacaaggcttccagatgtgga
aagcaagtgctacaggttaccctggagaatgtgagaagagtattaagaaataatacatgc
tttcagaggagacttcaatcaaagatactaaaaccttctgccaccgttttaacaaaagta
tctggagttggtacgtctgttggccagaagcttcaggggctgcagaatatcacggagaaa
acttaccgtcaagagagagaacgtttgagaagaatgaaccttgacagaaagcttctaatg
gccgtgacaccttgggtgggcaatgtactcctgccttgcaccttgcaaactgggaagatg
gcttttcatcagacaaaagctgattctattcaagagaagattaagtcggtcagtctcgcg
agcactcctctgttcacgcttttcattcagctctttcagattgataccaatggctgcatg
aagattattcgtgagagaaggctaaggcagtcagagcttcttggggctaatgcaagaagg
cctcagcaggcttcccaaaatacggagacttcttcaggcagttcgtcacaaccttgtact
cagaggaactcccgaaggggcataccaaggaatgctgtcaggagaccagttgccttaaaa
gcaagggagacttctgctgccttgcagagcagtgctcctgccgtgcagggagctcctcca
gcccaagtgcaaaggcagaagcctaaaactgtctcagaattactgagagaaaagcggcta
agagaatcccgggctaagaaagctatgcagaggacagtatttgttgcccctcaggtgctg
gtttcgggacctctgataatccagcacccaccacagcgaatcattccttctgcacaagca
gggagcaaacctgcggcagttggttgtacaaatagcgaagtacagtgtgcaccagctcca
ttgccagcatttacttctgttgcaggttcaacttctgctgctgtgcttgaaaaccattcc
tcatcagtgccggaaaccagggaaagccctggttcctcacaagggacagaactccagtcc
agtaaggaactaaaagagcaagctttggaaagtagctctgaaggagggttttttccaggc
acaaatccagctgcagcagagcaggccccgcatcagggagggtgcaatggtcaggtcgta
gctggtagctcagcttcagtagtgttgcaaaaccaagcttttgtgccacatcagattaca
gtggtgcctgttggcattgagtctggcaccaacaaattgtctctttccacaccagttacc
tgtgacctgaatagtaatgggtcacaacagaggccggtcaatctattgcctgctcttgta
actccacaaactggttcgcatttgattcccagcagcatactgcctttcgcgtgggttgta
acgccacaggctttgctccccaccgctgtacaaactgtggtgggtgttccccaaggactg
ccagctgctgctgtgagaagtcaatgtccgacaaccgtgacttccgatggcaatgtctct
ggcttaggagtgcctcccgtaccagctggagcaaatacacctcaccccatcagtgcagag
acaaaagcaccgagtgcccagctagcagaaggagtacctttgggaaagacagctaaccat
tccacagttctcttacctgtgacctcagcaagtcctggatgcaccacatcttctgcagca
cctgcatgttcaggtggcttctccaaggcttcggacccctctgcggctcagagtgctcct
ccacctgatgcacccgccctgcatgctgtgctgctgccgcaaacacagctacctgcaagc
actcaagggtctgattcccaatgtgtgtcaagtctcactagcttggggaagagccatgac
gccactacaacaagcggatcatcctccaatgcgagcgttgtcgtgaaagggactgtgctc
cagccaggagatccagttccccataacaatgtcccaaggaactctgattgctttgctgca
caagcattgaaaaatagacctattgctgccaaacctccaactgcgcagcctgctgacagt
cccccccagccagccacttcgagcgcagaaaagaatcaacttgactttagcctgatttcc
cttgaagatgaggggctagtgaaggagtggctgactgggaaacaaggtgtccgggtacca
tcactgcaaaccaggttgccttatttgccaccttttctgtgcaatttaaaaaccctctca
aagctacttctgcagaaagcagctctagaagagcaagcggcatgtcttctgccttctgat
gccaatcaggatgagggcactggggttgatttgcacgctatcagagagctggtgcagcag
aaactcggcgataaccctgcttacctcctactgaaagccagattcctagcagcctttaca
ctcccagctgtactagcaactctgcctcctccaaaagtgacaacaactctgtcagccagc
aggaagcaatacgaagagagtgatgaagaggagtggcagagcgaggaggacgtgtctgag
gaagagagttgtgggaatgaattaacaggtgtacggttggattggacagttggagatgag
cctggagataaagatgctgatttattaaatcagggcatgggagctgaagagaatgctgca
cagtctgtcttggactcctgcactgatgtggctgatgccagtgctcctcaaatcaggaga
agtgcccgcttcaggaaaaggaggaggatgagtcactggaatgaggtctgccttcctacg
tggcagtag
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