Phalacrocorax aristotelis (European shag): 142065873
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Entry
142065873 CDS
T11493
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142065873 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142065873 (NUP50)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142065873 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
142065873
NCBI-ProteinID:
XP_074968733
LinkDB
All DBs
Position
1:complement(140886362..140899826)
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AA seq
470 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNVGSESESGGAFKG
FKGFILPTGKGGGGFSGFGNGAGIKPLEGLSNGSSSVSSTPSFSSLKTTSETQSAFGSTV
SNGPTTTTAFTEKKAASPKANGGSQPSSSGYAQSKVCSSSVYHKQLAALNCSVRDWIVKH
VNTNPLCDLTPIFRDYEKYLANIEQQHGSSGDSGSENESNKTPGAQSVSTFGNSKLQQGS
TFLFSNNKPEDTSDKKPEATSEKKDPSLGATSTVSFNFGKSVDSSVLGSLGSGTLSSFSF
SPGNSGLFGKDANQAKSVTAVSTNVLEAQAESGNSDDKGEEEEEEPPKVVVNEIKEDDAF
YSKKCKLFYKKDNEFKEKGVGTLHLKPAGNEKTQLLVRADTNLGNILLNVLIPPKMPCTR
TGKNNVLIVCVPNPPIDEKNPAAPVTMLIRVKTSEDADELHKILLEKKEA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaattgcagagaaggaactgactgacagaaactgggatcaggaggatgaa
gctgaggaggtggggacgttctcagtagctagcgaagaagtcctgaagaacagagctatt
aaaaaagccaagcgccgaaatgttggatcagagtctgaaagtggaggagcttttaaaggg
tttaaaggctttatattgcccactggaaaaggaggaggtggcttcagcggatttggtaat
ggtgcgggaataaagcctttagaagggctgtctaatggaagcagcagtgtctctagcact
ccttctttcagcagtttaaagaccacctctgaaacacaatcagcatttggatccacagtg
tcaaatggtcctactactactactgcgtttactgagaaaaaggctgcaagcccaaaagcc
aatggtggcagtcaaccgtcctcatctggctatgctcagagtaaagtgtgtagctccagt
gtttaccacaaacagttagcagctttaaactgttctgtgcgtgactggatagttaagcat
gtaaacacaaacccactctgtgacctgacgcccatctttagagactatgagaagtattta
gcaaatattgaacagcaacatggaagcagtggtgatagtggctctgaaaatgaaagcaac
aagacacctggcgctcagtctgtttctacatttgggaattcaaagctacagcaaggatca
acttttttgttcagcaacaacaaacctgaggatacctcggacaaaaaacctgaagctaca
tccgaaaagaaagacccctcattaggagctacatcaacagtctcatttaattttggcaag
agtgtcgacagttctgttttgggttcccttggttcaggaacgcttagtagcttctcattt
tctcctgggaattcaggtttgtttggaaaagatgcaaaccaggctaagtctgtcactgcg
gtatccaccaatgtattggaagctcaggcagaaagtggcaatagcgacgataaaggagaa
gaggaggaagaagagccaccaaaagtcgttgttaatgaaataaaagaggatgatgctttc
tactcaaagaagtgcaaactgttctacaaaaaggataacgaatttaaagaaaaaggtgta
ggaacattacacttaaaaccggcaggaaatgaaaaaactcagctcctagtccgagcagat
accaatttaggaaacatactgttgaatgttctaattccacccaagatgccgtgtacgaga
accggaaaaaacaatgttcttatagtttgtgttcctaatccaccgatcgatgagaagaat
ccagctgctcctgtcactatgttaataagggtgaaaacaagtgaggatgcagatgagttg
cacaaaatcttactggagaaaaaggaggcttaa
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