Phalacrocorax aristotelis (European shag): 142066099
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Entry
142066099 CDS
T11493
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
142066099 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
parx04121
]
142066099 (RNF43)
Enzymes [BR:
parx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142066099 (RNF43)
Ubiquitin system [BR:
parx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142066099 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
KIAA1549
zf-ANAPC11
zf_RING_Vps8_fungal
zf-C3HC4_3
DUF5305
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
142066099
NCBI-ProteinID:
XP_074969216
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All DBs
Position
18:12490656..12553638
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AA seq
833 aa
AA seq
DB search
MSAGPQLQLAVLWPWLLMATLQAGLGHTGLVLAAAVESERSAAQKAIIRVIPLKVDPIIL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSLQQQTMQAIGQLATR
KYQARCRQASRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSMDQATATGSRLAPRDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRS
FPPEPAHSNHFFHSPELSQVDFGTIHYVPYRPATSLLTCSHPSPLAPGLLGQQHPNPSAC
GQTQPPHRTCSLQSQPPCLGLKAALAQKQHRAPALRRGVSHGHQHNSSGSGESYLTEHSG
YLADGPASDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
TTDNGLEQPRHPRETRPRSLDLLVPGGAAPAKPQVLSHIHYHHHQHHHYRRDTEWPPGRA
GQGPGQRKSRYSGAKIGFHSARTEKRTEKSHHCQQPLESSTVLQEAALTGQPAFPQQGWE
STHTPSASPNRLDFSVDANRQSGAAGTSPVPLPPRHSLQSRHHRRKRKCPLEPDPALLPE
DSASPKACDAHIPHGHPAGHPCLPEVQPLIPSAPLPCSSGSRPLWKCLVPQSGSELKRQE
DGLSGWEGNRTVPADFSGTGTPRHSLSLHLHCPSQQGSQGSEEEVQDVHEHSV
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccagctgcagctggctgtcctctggccttggctgctcatggcgacc
ctgcaggcaggacttggccacacggggctggtgctggcggcggcggtcgagtcggagagg
tcagcggcgcagaaagccatcattagggtgatccccctgaaagtggaccctatcatactg
gaaggggagtttgcaaacgttgctgaggtgactccagccgaaggaaaactgctgcagtcc
cacccgctgtccctgtgtaacaccagcgaggatgaacacaccgaatcgggattcatcacc
attgtcaagcttgaacagccagatcgggatccaaacccctgcctgtcactggctaacaag
gcaaagctggcgggggagcgtggagcccgtgcgatcctttttgacattaccgatgatgaa
agtgctgctgatcagctgagaaagcccagaggtctgagtcagcctgtcgttctgatcagg
ggccacgatgctgagcttctcatgggagtcgtgaacaagaacagagaggcccacgtgaag
atagaggtcaaggagccaccagcttggccggactacgacgtgtggattcttctcacggtg
gtcagcactgtggtcgtcatcattctgatttttgttgtccgcacaaagtgccagctgaac
aggactcaggactccttgcagcagcagaccatgcaggccatcgggcagctggccacgcgc
aagtaccaggcaaggtgccggcaggcatcgcggtgggactcggccagcagctgcagctca
gccccggtctgtgccatttgcctggaggagttcagcgagggccaggaactgcggatcatc
tcgtgctcccatgagtttcaccgggagtgcgttgacccctggctgcagcaacaccacaca
tgtccactttgcatgttcaatatccttgccagagactcgatggaccaggccacagccact
ggctccaggctggcccctcgggacatggagcctggacggcgactccacctgttccgccag
cacccgggacatgccctttaccacctcccacacgcgtatcctcagaggaacctcaggagc
tttcccccggagccagcccacagcaaccacttcttccactctccggagctctcccaggtg
gattttggcaccatccactatgttccctacagaccagccacctccctgctcacctgcagc
cacccgtcccccctggctccgggcttgctgggccagcagcatcccaacccttcagcatgc
ggacagacgcagccaccacacaggacctgttcgctccagtcccagcccccctgcctgggg
ctcaaggcagccctggcacagaagcagcaccgtgcacctgccctgcgccggggggtcagc
cacgggcaccagcacaacagcagtggttctggggagagctatctcacggagcacagcggt
tacctggcagatgggccagccagcgactccagttcagggccctgccatggctcctccagc
gactccatgttgaactgcacggacgtcagtctgcagggcatccacggcagctgctccact
ttccgcagctccctcagcagtgactatgaccccttcgtgtactgcagctcagagggaccc
actacggacaacggcctggaacagccacggcacccaagggagacacggcccaggtccttg
gacctgctggtgcccgggggtgctgctccggccaagccccaggtgctcagccacatccac
taccaccaccaccagcaccatcactatagaagagacacagagtggccacctgggcgggct
gggcaggggcctgggcagcgcaaatcccggtactctggggctaagattggcttccacagt
gctcggacagaaaagaggactgagaaaagccatcactgtcagcagcctctggaaagcagc
actgtgctacaggaggcagctctgacaggacagccagcatttccccagcaaggctgggag
tccactcataccccctctgcttctccaaacaggttggacttcagtgtagatgccaacaga
caatcgggagcagctggcacatcgcctgtcccgctgcctccgagacacagcttacagagc
cgtcatcaccgaaggaaaagaaagtgtcccctagagcctgaccccgctctcctgcctgag
gactcagcctcacccaaagcttgtgatgctcacattcctcatggccatcccgctggccac
ccctgcttgcccgaagtccagcccctgatcccaagtgctcccctgccctgcagctcaggc
tctcggccgctctggaagtgtttagtgccacagtctggctcggagctgaaaaggcaggag
gacgggttgtcaggatgggagggaaaccgcacagttcctgctgatttttcagggacaggt
acccccagacacagtctgagtcttcaccttcactgcccgtctcagcagggtagtcaggga
tctgaagaggaggtccaggatgtccatgaacactcagtttaa
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