Phalacrocorax aristotelis (European shag): 142066130
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Entry
142066130 CDS
T11493
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03020
RNA polymerase
parx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
142066130 (POLR2J)
09124 Replication and repair
03420 Nucleotide excision repair
142066130 (POLR2J)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parx03021
]
142066130 (POLR2J)
03400 DNA repair and recombination proteins [BR:
parx03400
]
142066130 (POLR2J)
Transcription machinery [BR:
parx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
142066130 (POLR2J)
DNA repair and recombination proteins [BR:
parx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
142066130 (POLR2J)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
142066130
NCBI-ProteinID:
XP_074969274
LinkDB
All DBs
Position
18:8010858..8012897
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AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcctccggctttcgagtccttcctcctctttgagggcgagaagaagatcacc
atcaacaaggacacgaaggtgcccaacgcctgcctcttcaccatcaacaaagaagaccac
acgctggggaacatcatcaagtcgcagttactgaaagacccccaggtattatttgcgggc
tacaaggtcccgcacccactggaacacaaaattatcatccgcgtccaaacgacccccgat
tacagcccccaggaagctttcaccaacgccatcacggacttgatcagtgagctctccctc
ctggaggagaggttcagggtggctattaaagacaaacaagaaggcattgagtaa
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