Phalacrocorax aristotelis (European shag): 142066242
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Entry
142066242 CDS
T11493
Symbol
DDX52
Name
(RefSeq) putative ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
parx03009
]
142066242 (DDX52)
Enzymes [BR:
parx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142066242 (DDX52)
Ribosome biogenesis [BR:
parx03009
]
Eukaryotic type
90S particles
Helicases
142066242 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
142066242
NCBI-ProteinID:
XP_074969566
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All DBs
Position
18:complement(5037329..5045869)
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AA seq
623 aa
AA seq
DB search
MEAQELFRRLGAGARFDVRRFGHDARRFGVIKESGGRVSLESLDFFRREEGASLGSAEEG
RGLAAAGEEGRGRDQQKEDGAGNNDGETTGKRKRTAESSERKRKKKKTRGAASMPELSES
NGIKWMSSLEAKFEDTKDKKPTAEKLERLRREKINRFRNQHKINVQGTDLPDPIATFDQL
QKEYKIHPKIMENIQAAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFCIPLLAH
LKQPRNKGFRALIISPTRELASQTHRELVKLAEGTGFRIHMIHKAAEAAKKFGPKSSKKF
DILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSHL
VRRAMFSATFAHDVEEWCKLNLDSVVLVSVGARNSAAETVEQELLFVGSETGKLTAMREL
IKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQRDNVVHSFRAGKIWVL
ICSALLARGIDFKGVNMVINYDLPTSAVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRS
IANVIQRAGCPVPDYIKHFPKLQSKQKKKFIKKPLSRESICTTPQCFLKKAKRKMKATKE
NIKEKKKVKEDKSGSKLQTVSKT
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcaggagctatttcggcgcttgggcgccggtgctcgttttgacgtccggcgg
ttcgggcacgatgcgcggcgcttcggggtgataaaggagagcggcggcagagtttcgctg
gagagcctcgacttcttcaggcgcgaggagggcgcctctctggggtctgcggaagagggc
agggggcttgctgcggctggagaggagggaaggggtagagaccagcagaaggaggatgga
gctgggaataacgacggagagacgacaggaaagagaaaaagaactgcagaaagcagtgaa
cggaaaagaaaaaagaaaaagacacgaggagcagcatcaatgccagagttgtcagaaagt
aatggaataaagtggatgtcctctctggaagcaaaattcgaagatacaaaagacaaaaaa
cctactgctgaaaaacttgaacgcttgagaagagaaaagataaaccgcttcagaaatcaa
cacaagatcaatgttcaaggaacagatcttcctgacccaattgccacgttcgatcagctt
caaaaggaatacaaaatccaccctaaaatcatggagaatattcaagctgctggcttccag
gtcccaacaccaatccagatgcaggctattcctgtcatgcttcatggtcgggaacttcta
gcttcagctcctactgggtctggaaaaacactggcattttgtattcctctcttggcacat
ctgaaacaacctaggaacaaaggattcagagcactgatcatatcacccacccgagaactc
gctagccagactcatcgggagctggtcaagttggctgaggggacaggcttcagaatacat
atgatccacaaggcagctgaagcagcaaagaagtttgggcccaagtcttctaagaaattt
gatatactagttactactccgaacagactcatttatttgctgaaacaagatcctccagca
atagacttgaccagtgtggagtggctggtggtggatgagtcagacaaactgtttgaagat
gggaagtcagggttccgagatcagctggcctccatcttcctggcatgcacgtcccacttg
gtgagaagagccatgttcagcgcaacctttgcacatgatgtagaggagtggtgtaaactc
aaccttgacagtgtcgttctggtgtctgttggagcaagaaactctgcagcagagacagta
gaacaagagctgttgtttgttggatctgagacaggaaaactgacggcaatgagagagctt
attaaaaagggttttgctcctccagtccttgtttttgtacagtctattgagagggctaaa
gagcttttccatgaacttatttatgaaggcatcaacgtggatgtcatccatgcggacaaa
actcagcaacagagagataatgtagtacacagtttcagagctggaaagatctgggtgctc
atctgctcagccttactagctcgagggattgacttcaaaggagtgaatatggtcattaac
tatgatttgccaacaagtgcagtggaatacatccacaggataggtcgtactggaagagca
gggcacaaaggaaaagcagtcactttctttacagaagatgataaacctttgttacggagc
atagccaatgttattcagcgagctggctgtcctgtgccagactacataaaacactttccc
aaactgcaaagcaaacaaaagaagaaattcattaagaaaccactgtcaagagaatccatt
tgtaccacccctcagtgcttcttaaaaaaagccaaaagaaaaatgaaagcgacaaaggaa
aatattaaggaaaaaaagaaagttaaagaagataaaagtggcagtaaattacagactgtt
tcaaaaacctga
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