Phalacrocorax aristotelis (European shag): 142066267
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Entry
142066267 CDS
T11493
Symbol
SRSF1
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03040
Spliceosome
parx05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142066267 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
142066267 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
parx03041
]
142066267 (SRSF1)
Spliceosome [BR:
parx03041
]
Common components
Common spliceosomal components
SR proteins
142066267 (SRSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
142066267
NCBI-ProteinID:
XP_074969641
LinkDB
All DBs
Position
18:5147949..5151969
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AA seq
248 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
YRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
HSRSRSRT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagggggcgtgatccgcggcccagccggcaacaacgactgccgtatctacgtg
gggaacctgccccccgacatccgcaccaaggacatcgaggacgttttctacaagtacggg
gccatccgcgacatcgacctcaagaaccgccgcgggggcccgcccttcgcttttgtcgag
tttgaggacccaagggacgcggaggacgccgtctacgggcgggacggctacgattacgat
gggtatcgcctccgcgtggagttccctcggagcggccggggcaccggcagaggtggcggc
ggcggaggagggggcggagccccccggggcaggtacggccccccgtcccggcgctcggag
tacagagtgatcgtctcggggctgcctccaagtggaagctggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgttttccgagatggcactggtgtcgtg
gagtttgtacggaaggaagatatgacctacgctgtgcgaaaactggataacactaaattt
agatctcatgagggagaaactgcctacatccgtgttaaagttgatggcccaagaagtcca
agctatggaagatctcggtcacgcagccgtagtcgtagcagaagccgtagtcgaagcaac
agcagaagccgcagttattccccaagaagaagcagaggatctccacgctactctccccgc
cacagcagatcccgatctcgtacataa
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