Phalacrocorax aristotelis (European shag): 142066372
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Entry
142066372 CDS
T11493
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
parx03037
]
142066372 (NPHP4)
Cilium and associated proteins [BR:
parx03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
142066372 (NPHP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
NPHP4_C2_2nd
Ig_NPHP4_1st
Ig_NPHP4_2nd
Ig_NPHP4_4th
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
142066372
NCBI-ProteinID:
XP_074969809
LinkDB
All DBs
Position
19:complement(9120084..9143030)
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AA seq
1419 aa
AA seq
DB search
MSEWERVFLQSLAVPPHRQRTRARPPRPAAFRCVLKHLEGAPLAQGAEYQLRLSLFDATY
HHFFGRTWRSSQRAARATPPHLARVAFNETIYFHTSLNHPGVAAVVEVVVTAGKGDGGSQ
HLSCGFGLIPLFGSRSEATDPAAEDRTLKLYHGTPRALLHPRFQDPLEKNKYLTVMEKSH
LRYTLKLHQPLETIFHLLPENLPMSGLQTVPGLLPARGDASDCLQKPRLMKPITCYLERL
SVQLYPSLEEFEEELLDLLNSDRLLKGLARGGMLSHPVPPRCPSWKTCLLQANAAPDGDG
MVVRERRLHVGVHNGLRFVQVPQVAVLVPEAEAMRGGCPGVPGSGARGAGQALVLRSRIH
LSEMVPHPAFGVCFQLEYVFCASGRADGKALPGSARSEAADMRSVRWAVWSPDLGAGEAD
VVLPLRGGAHRGPCQALVYRTPPSSRSSHQGKHVESGTVQFHVSTVSEEHLVTAPEILRK
DRDELVKPPTPSLSLPTPLRTAASPRGQGLSVSQLSVPLRGGGQPPAQRSRSSRQEGGIT
HLEADLSSLGPDSCGGDQLRALPFTPLQVPITAVGLQAGSSRTLLSRASLARLHAAGFPE
ILDRNQQPVEISVPADPASFSLQLEEADPLQGNEIILQFLAFGRDAQDGMEGTWPRTVFL
TFQFYRFPPVTTPRLQLASTDGGPVAGPPVPAQILVRVNKDGTLSTKAPGLQLKYMVDPA
FLRPGEQRWFVRYLAEHSLQIDVWDGDSLLLVGSAAVKLESLLRQGQAAVRTHHELEVAT
TEYEPDATVMGREALRHGALRPLGIRVAVRGRLHLCLANVGHPCEETPGQPPSPLPSRSR
VVPAPAGVSSISASSWFSLNAAGGGRVSRARRLVEVDGELAAALHSRRPEVRLAPTAAPS
EAAAARRRKLRRMALVRQQEDAGGGRTSWLSGWQEQRARHVRDLQIIDAYREHIKGESIS
RMLSQAITATHTVHAVLGTAEFFEFTLKNPYGVQHTVTIEVDHPELSVVLDPREWRHFKE
LTKSITPVEEEMFHLRDDLRPQVYLRPSETVRIPFKYQTFSADPAVVAAQGPAGLGAGAD
AAVCSLGKSGAGQTKHIQVSFQVSGGKPIALLRVKVEPQPHVVDQTFRFYHPELTFLKKT
IRLPPWHTLPGAPVGMPGGQPEMFVRCSDPNIICETKNMGPGEPQDVFLKVAGGPSPQIK
KFFVAIYIDPWLAAPVQIWQFYLHSLQRLDVSCTAGQLSRLSLLLRGTPAPRRVRAFTSH
PQELEVDPDGAFLLPANGIQDLYIGVRPRRAGSRFIYLNLVDVESHQLVSSWLLCLSCRQ
PLISKAFEISLPAGGGRGCNKRITYTNPYPSPRLYFLCTNRPDLLQFKEDSFEVAGGEVY
TIGLRFAPSQSVGEEEILIHINDHEDKNEETFCVKVLYQ
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtgggagcgggtgtttctgcagagcctcgccgtccctccgcaccgccagcgc
acacgggcgcgcccgccgcgccccgccgccttccgctgcgtcctgaagcacctggaaggg
gcccccctcgcccagggagctgagtaccagctgcgcctctccctcttcgatgccacctac
caccacttctttgggaggacatggaggagcagccagcgagctgcccgtgccaccccgccg
cacctggccagggtggctttcaatgagaccatttacttccacacctccttgaaccacccc
ggcgtcgccgccgtcgtggaagtggtggtgacagctgggaaaggggatggaggctctcag
catctctcctgcggctttggactcatccccctctttggcagcaggtcggaagcgacggac
ccagccgctgaggacagaacactgaagctgtaccatgggacgccgcgtgccttactgcac
ccgcgcttccaggaccccctggaaaagaacaaatacctgacggtgatggagaagagccac
ctgcggtacaccctgaagctccaccagcccctggagacgatatttcaccttcttccagaa
aaccttccgatgtctgggctgcagaccgttcccggcttgctgccggcacgtggagatgca
agtgactgcttgcagaaaccccggctgatgaagcccatcacctgctatctggagaggctg
tctgtccagctgtacccttccttggaggaatttgaggaagaactgctggacttactgaac
agcgatcgcttacttaaggggttggcacggggagggatgctgagccaccctgtgccacct
cgctgcccgagctggaaaacttgcctgttgcaggccaacgccgcgccggacggtgatggg
atggtggttcgggagcggcggctgcacgttggcgtccacaacggcctgcgctttgtccag
gtgccacaggtggccgtgctggtgccagaggcagaggcgatgcggggtggctgcccaggg
gtgcctggctccggagccaggggtgcagggcaagccctggtgctgaggagccgcatccac
ctgagcgaaatggtccctcacccggcgtttggggtctgtttccagctggagtacgtcttc
tgtgcctcagggagagctgacgggaaggccctgcccggcagcgcccgcagcgaggcggcc
gacatgcgctcggtgcgctgggctgtctggagccccgacctgggcgccggcgaggcagac
gtggtcctgcccctgcgcggcggtgcccaccgcggcccctgccaagccttggtctaccgg
accccgccgagcagcaggagctcccaccaggggaagcacgtggagtctgggactgtccaa
ttccatgtttccactgtttcggaagaacatcttgtaactgctccagagatcctacgtaaa
gaccgggacgagttggtgaagcctcctacgccatcgctgagtctgcccaccccgctgcga
acggcagcctccccgcggggacaggggctgtcagtgtcccagctgtcggtcccgctgcgg
ggtgggggccagcccccggcacagcgcagccgcagctcgcggcaggagggggggatcact
cacctggaggccgacctcagctccctgggcccagactcctgcggtggcgaccagctgcgg
gcgctgcccttcaccccgctgcaggtgcccatcactgctgtggggctgcaggcaggcagt
tcccgcacgctgctgtcccgtgcctccctggcgcgcctgcatgctgccggcttcccggag
atcctggaccgcaaccagcagccagtggaaatctcggtgccagcagatccagcgagtttc
agcctgcagctggaggaagctgaccctctgcaaggcaatgaaataatcctgcagttcctg
gcttttggcagggatgcccaggacggcatggaggggacatggccgaggacagtcttcctc
actttccagttctaccgtttcccgccggtcaccacgccgcggctgcagctggccagcacg
gacggggggccggtggccgggccgcctgtgccagcgcagatcctcgtccgggtgaacaag
gacgggaccctcagcaccaaagcaccaggcttgcagctgaagtacatggtggatcctgct
ttcctgcgacccggggagcagcgctggtttgtgcggtacctggccgagcacagcctccag
attgacgtctgggatggagactccctgctcctggttgggtctgctgccgtcaaactggag
tccctgctgcgccagggccaggcagctgtcaggacccaccacgagctggaggtggccacg
accgagtacgagccagacgcgacggtgatgggccgggaggcgctgcggcacggtgccctg
cggcccctcggcatccgcgtggcagtgaggggccgcctccacctctgcctggccaacgtc
ggccatccgtgcgaggagaccccagggcagcccccatccccactgccgtcccgctcccgc
gtcgtgcccgcaccggctggtgtcagcagcatctcagccagcagctggttctccctcaac
gccgctggcggcgggcgggtgtcgcgggcgcggaggctggtggaggtggacggcgagttg
gcggccgcgctgcacagccgccggccggaggtgaggctggcccccacggctgcccccagc
gaggccgcggctgcccgccggcgcaagctacggcgcatggcgctggtgcggcagcaggag
gacgccggcggcgggaggacgtcctggctctcgggctggcaagagcagcgtgcccggcat
gtgcgggatctccagatcatcgacgcctaccgggagcacatcaagggcgagagcatctcc
cggatgcttagccaggccatcaccgccacgcacaccgtgcacgccgtgctggggacggct
gagttctttgagttcaccctgaagaacccctacggcgtccagcacactgtgaccatcgag
gtcgaccaccctgagctcagcgtcgtactggacccgagggagtggcgccacttcaaggag
ctgaccaagagcattacaccggtggaggaggagatgttccacctccgtgacgacctcagg
cctcaggtctacctgcgccccagcgagaccgtccgcatccccttcaaataccagaccttc
tctgcagaccccgcggtcgtcgcggcacaggggccggcagggctgggcgccggtgccgac
gcggctgtgtgctccctggggaagagcggggccgggcagacaaagcacatccaggtctcc
ttccaggtgagcggggggaagcccatcgcactcctgcgggtgaaggtggagccgcagccc
cacgtggtggaccagaccttccgcttctaccacccggagctcaccttcctgaagaagacc
attcggctgcctccctggcacacgctccctggcgcaccagtggggatgccaggggggcag
ccagagatgtttgttcgctgcagtgaccccaacatcatttgcgaaaccaaaaacatgggg
cctggggagccgcaggatgtcttcttaaaagtagccggaggaccaagcccacagatcaaa
aagttctttgttgctatttatatagacccctggctggcggcgcccgtccagatctggcag
ttctacctgcactcgctgcagcgcctggacgtcagctgcacggccgggcaactcagccgc
ctctccctgctgctgcgaggcaccccggccccgcggagggtgcgggcgttcacctcccac
ccccaggagctggaggtggatccagacggcgccttcctcctccctgccaacggcatccag
gacctgtacatcggcgtgaggcctcggcgggctggcagcaggttcatctacctcaacctg
gtggacgtggagtcccaccagctggtgtcctcctggctgctctgcctgtcctgcaggcag
cccctcatctccaaggcgttcgagatctcgctccccgcgggaggcgggagaggctgcaac
aagcgcatcacctacaccaacccctacccctcgcccaggctctacttcttgtgcaccaac
cggcctgacctcctgcagttcaaggaggattccttcgaggttgccggcggggaggtgtac
accatcggcttgcgcttcgccccgagccagagcgtgggtgaggaagagatcctgattcac
atcaatgaccatgaggacaagaacgaggaaaccttctgtgtgaaggtcctctaccagtga
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