Phalacrocorax aristotelis (European shag): 142066510
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Entry
142066510 CDS
T11493
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
parx Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
parx04515
]
142066510 (CLSTN1)
Cell adhesion molecules [BR:
parx04515
]
Cadherins
Cadherin related
142066510 (CLSTN1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
V_ATPase_I
Toxin_R_bind_N
SID-1_RNA_chan
PFF1_TM
Cadherin_C_2
Neur_chan_memb
Zip
Motif
Other DBs
NCBI-GeneID:
142066510
NCBI-ProteinID:
XP_074970070
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All DBs
Position
19:4627866..4668365
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AA seq
981 aa
AA seq
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MPPRRPGAQRSLPALASCLLLAALLCGGAGAARVNKHKPWIETTYHGIVTENDNTVLLDP
PLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLD
CELQKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGK
RYDNILKVEAVDADCSPQFSQICNYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTV
TAYDCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPGMRLETCDEPIT
SIQTTVELETNHIGKGCDRDTYSEKSIHRLCGASSGTAELLPPPSSAANWTIGLPTDNGH
DSDQVFEFNGTQAVKIPDGVVTINLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHH
YTLYVHNCRLVFLFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLNVEFPAVTLYVDGV
SYDPFPVTEDYPLHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELHMAQFFRGNL
AGLMIRSGKLENKKVIDCLYTCKEGLDLQMADGVGKGVKIHMNPSQSTLTLEGDDIDRVD
KAMQHISYLNSRQFPTPGIRRLKITSVVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSG
INHFARSASEFESSEGVSLFPELRIISTITREVEPEGDRDEDPTVQESLVSEEIMHNLDT
CEVTVLGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMVITGVDTMASYEEVLHLIRYRN
WHTVSLFDRKFKLVCSELNGRYVSNEFKVEVNVIHTANPVEHANHIAAQPQFVHPVHHTF
VDLSGHSLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQE
EDQQNVNRQQQLEWDDSTLSY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgccgcccgggcgcgcagcgctcgctgccggccctcgcctcctgcctgctg
ctcgccgcgctgctctgcggaggagcgggggccgctcgagttaacaagcataagccatgg
attgaaacaacctatcatggtatagttacagaaaatgacaacacggtgctcttggacccc
cctttaatagccctggacaaagatgcgcctctgcgttttgcagagagttttgaggtgaca
gtcaccaaagaaggtgagatttgtggatttaaaattcatgggcaaaatgttccctttgaa
gcagtggtagtggataaatccactggtgagggaataatacgctctaaagaaaagcttgac
tgtgaactacagaaagactacacgttcaccatacaggcctatgactgtggaaagggaccg
gatggagcaaatgcaaaaaaatcccacaaagcaacagtacatattcaggtgaacgatgtt
aatgagtatgctcctgtattcaaagagaagtcgtacaaggcaacagttattgaagggaag
aggtatgacaacatcctgaaagtggaagccgtggatgcagattgttcacctcagttcagc
cagatttgcaactacgaaattgtaactccagacgtaccttttgctattgacaaagatggt
tatataaaaaacacagaaaagttaaactatggtaaagaacatcagtataaactgacagta
acagcgtatgactgtgggaagaagagagctgctgaggatgtgttggttaaaattagcatt
aagcctacatgcaagcctggctggcaaggttggagcaaaagaatagaatatgagcctggt
actggttcgttagctctcttccccggtatgcgtttggagacatgtgatgagccaataacc
tcaattcaaacaacggttgaactagaaaccaaccatattggtaaaggctgtgacagagac
acctactccgagaaatccattcacaggctctgtggtgcttcttctggcacagctgagcta
cttccccctccaagcagtgctgctaactggacgataggacttcccaccgataacggtcat
gacagtgaccaagtctttgaatttaatggcacacaagctgtgaagattccagatggtgtt
gtcacaatcaatctaaaagagcccttcatgatatcagtatggatgaggcatgggcctgga
accaaagagaaagagacaattttgtgcaattcggacaagacagatatgaaccgccaccac
tacacactctatgtacacaactgccgacttgttttcctcttccgccaagatccttcagag
ggaaaaacatacaaacctgctgagtttcactggaaactaaatcaagtgtgtgacaaagag
tggcatcattatgtcctcaatgttgaattccctgcggtaactctttatgtggacggtgtc
tcatacgatcctttcccagtgactgaagattacccgcttcatccttcaaagatagaaacg
cagctcgtagttggagcgtgctggcaagaatatacaggaaatgaaaatgacaatgaaact
gtgcctgagacctctgcaggtggtgaactccacatggctcagtttttccgaggcaatctg
gcaggtttgatgattcgttctggtaaactggaaaacaagaaggtgatagattgcctgtat
acttgcaaagagggactggatttgcaaatggctgacggtgtcggcaaaggcgtgaagatc
cacatgaacccaagccagtcaacactgaccttggaaggggatgatattgacagagttgat
aaagccatgcaacacatttcctacctgaattcccgccagttcccaacacctgggatccgg
aggcttaaaatcaccagtgtggtcaaatgtttcaatgaagaggcctgcgtctccattcct
tctgtggagggatacgtaatggttttgcaaccagaggaaccaaaaatcagccttagtggc
atcaaccattttgcccgctctgcttcagagtttgagagttctgagggtgtttccctcttt
cctgagcttcgcataataagcaccattacacgggaggtggagccagagggagacagagat
gaagatcctacagtacaagagtctttggtgtctgaagagatcatgcataacctggatacg
tgcgaggtgacagtgctaggagaggaactaaatcaggaacaagaaagcctggagattgac
atgacacgattacagcagaaaggcattgagatgagtagttccaacctgggcatggtaatc
acaggggttgatactatggctagttatgaagaagttttgcatttgatacgctacagaaac
tggcacaccgtttctctctttgacagaaagttcaaattagtctgttctgagcttaatgga
cgctatgtcagcaatgagtttaaagtggaggtgaatgttatccacacagctaacccagtt
gaacatgctaaccacatagctgcgcaaccacagtttgttcatccagtgcatcacacattt
gttgatctctctgggcacagcttagctaaccctcatccgttttcagttgttcccagtaca
gccactgttgtgattgtagtttgtgtcagtttcctggtttttatgatcattctgggagtg
ttccgaatccgagccgcacatcagagaacgatgcgcgaccaggacactggaaaggaaaac
gagatggactgggatgactctgctttgaccatcactgtgaaccccatggagacgtatgag
gatcaacacagcagtgaagaggaagaggaggaggaggaagaagaaagcgaagatggggaa
gaagacgacatcactagtgcggagtctgaaagcagcgaggaggaagagggagagcaggag
gaggaccaacagaatgttaatagacagcaacagctggaatgggatgactctaccctcagt
tattga
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