Phalacrocorax aristotelis (European shag): 142067207
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Entry
142067207 CDS
T11493
Symbol
PPFIA4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142067207 (PPFIA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142067207 (PPFIA4)
Membrane trafficking [BR:
parx04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
142067207 (PPFIA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
142067207
NCBI-ProteinID:
XP_074971743
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All DBs
Position
21:2040244..2102438
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AA seq
1231 aa
AA seq
DB search
MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLSVTQSRLQ
ETLRERDQLQRQLNSALPQEFATLTRELSACREQLLEREEEISELKAERNNTRLLLEHLE
CLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERV
ATLEEQLVDAHRQVAALQQGTTREAPVGERDEREPKEPAQKLPWKRLSNGSAHPDDEAGR
VVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREA
LAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLESELANKESLHRQCEEKARHLQELL
ELAEQKLQQTMRKAETLPEVEAELAQRIAALSKAKERHGSIEEHLRQLESQLEEKNQELA
RARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIE
EHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHARSHMGSTTDLRFPLSAMVHAPAEP
FGAAPGLPRAQKGRFAARRDEPAKDWEQAQAGSVLATGPHTFDSDPEISDVDEDDRETLF
SSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEG
LNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLNRMGIMTLPSDLRKH
RRKLLSPAARDESREDKTTIKCETSPPSSPRTLRLEKLGHPALSQEDGKSSLEEQASNPS
SNSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQVLLTDVEVGMQDPLGL
GKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANV
KSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHE
EMENMATSTKTDTEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLD
HLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREDTQHEIKDVLVWTNDQ
VIHWIQSIGLREYANNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFN
NLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINMLSGSAETLPAGFRVTSLVPLP
PPSAPAKKMPPEVGASGSPRLETSTVRTYSC
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaagtgatgcccaccatcagcgagggggaccctctgggtcccccacagggc
tctgaagcggatgcggactttgagcagctgatggtgaacatgctggatgagagggacaag
ctgctggacaccctgcgggagacccgtgagacgctctctgtcacccagagccgcttgcag
gagaccctacgggagcgtgaccagctccagaggcagctcaactcagccctcccacaggag
tttgcaacgctgacgcgggagctcagtgcatgccgggagcagctcctggagagggaagag
gagatctcggagctgaaagccgagcgcaataacacccggctcttgctggagcacctggag
tgcctggtgtcgaggcatgagcggtccctgaggatgaccgtggtcaagcgtcaggcccag
tcgccgtccggggtttccagtgaggtcgaggtgctcaaggctctcaagtcactctttgag
catcacaaggcgctagacgaaaaggtcagggaacgcttgcgagcagccttagagcgagtg
gcaaccttggaggagcagctcgtggatgcccatcggcaggtggcagctctgcaacaaggc
actacgcgggaggccccggtgggtgagcgggatgagagggagcccaaggaaccagcgcag
aagcttccgtggaagcggctctccaacggctctgcccacccagatgatgaggcagggcgg
gtggtggagctgcaggagctcctggagaagcagaatttcgaagtggtccaggccaaggag
cgcatctctgcattggctgccagcgtcgccgagctggaggaggatctgggcaccgccagg
aaggatctgatcaaatcagaggagatgagcagcaagtaccagagggacctccgagaggcc
ctggctcagaaagaggacatggaggagaggatcaccacactggagaaacgctacctggca
gcccagcgagaagccacctccatccatgacctcaatgacaagctggaaagcgagttggcc
aacaaggagtccctgcaccgccagtgcgaggagaaagcccggcacctgcaggagctgctg
gaactggcggagcagaagctgcagcagacgatgcggaaagcagagacgctgcccgaggtg
gaagcggagctggcccagcgcatcgccgcactcagcaaggcaaaagagaggcacgggagc
atcgaggagcacctccggcagctggagagtcagctggaggagaagaaccaggagctggcc
agggcccgccagcgggagaagatgaatgaggagcacaacaagcggctctcggacaccgtg
gaccgtctgctgagcgagtccaatgagcggctgcagctgcacctcaaggagaggatggcg
gccttggaggagaagaacacattgttacaagagctggaaaatacccaaaagcagatagag
gaacaccagcacgacaagcgacggttgtccgacgagattgacaaactgaggctggaggtc
gatcagctcaagaccagaagtgggacattcgtggagagcgtgcatgcaaggtcccatatg
ggcagcaccacagacctgcgcttcccactgagcgctatggtccatgcccccgctgagccc
ttcggagcagccccgggcctgcctcgggcacagaagggccgattcgccgcccggcgagat
gagccagccaaggactgggagcaggcccaggcaggcagcgtcctggccacggggcctcac
accttcgacagcgaccccgagatctctgatgtggacgaggatgaccgtgagacgcttttc
agttccatggacgtgctctcccccggtgggcactcggatgcccagacattggccatgatg
ctccaggagcagctggatgccatcaatgaggagatcaggatgatccaagaggagaaggag
tccaccgagctccgcgcagaggagctggagacccgcgtcacaagcggcagcatggaaggc
ctcaacctcacccagctctgcaaaagggcttccatccccacctcgctgacagccctgtcc
ctggccagctcatccccaccgctcagcggccgctccacccccaagctctcctcccgcagc
gctgctcaggacctcaaccgcatggggatcatgacgttgcccagcgacttgaggaagcac
cggaggaaactgctatcacctgcagctcgggatgaaagccgagaggataaaaccaccatc
aaatgtgagacatccccaccatcctcacccaggacgttgcggctggagaagctgggccac
cccgcactaagtcaggaggatgggaagagctcgctggaggagcaggccagcaaccccagc
agcaacagcagccaggactccctgcacaagggctccaagaggaaggggatcaaatcctcc
atcgggcgcttgttcgggaaaaaagagaagggtcgcttgattcagctgagcagagaaggg
gccacggggcaggtgctgctgactgacgtggaggtgggcatgcaggaccctctgggactt
ggcaagctgggtgctcaggctgagaaggatcggcgcctgcggaagaagcacgaactcctg
gaagaagctcggaggaaaggattgccctttgctcactgggacggccccaccgttgtctcc
tggctggagctctgggtggggatgccggcctggtacgttgccgcttgccgagccaacgtg
aagagtggagccatcatgtcggccctgtctgacactgagatccagagggagatcggcatc
agcaatgcgttgcatcgcctgaagctgcgtctggccatccaggagatggtctcactcacg
agcccctcggcaccgcccacctcgcggacgtcctccggaaacgtctgggtcacccatgag
gagatggagaacatggcgacttccaccaagacggacacagaggaaggaagctgggcgcag
acactggcctatggggacatgaaccacgagtggattgggaacgagtggctgcccagcttg
ggtctcccgcagtatcgcagctacttcatggaatgtcttgttgatgcacggatgttggac
cacctcaccaagaaagatctcagagtgcacttgaagatggtggacagcttccatcgcacc
agcctgcagtacggcatcatgtgcctgaagaggctcaactacgaccgcaaagagcttgag
aggaggcgagaagacacccaacacgaaatcaaagacgtgttggtgtggactaacgaccag
gtcattcactggatccagtccattgggcttcgcgagtatgcgaacaacctcgttgagagt
ggtgtgcatggggcgctcctcgccctcgatgaaaacttcgaccacaacagtctggcgctt
gtgttgcaaatccccacgcagaacacgcaggctcgacaagtgctggagagggagttcaac
aacctgctcgccttgggcacagatcggaggctggacgatggcgatgacaagaccttccgt
cgaaccccgtcctggcgaaagcgcttccgcccacgagacgttcacagcatcaacatgctc
agcggctcagccgagacgctgcccgctggcttccgcgtcaccagcctggtgcccctgccc
cctccatccgcccctgccaagaaaatgcccccagaagttggtgcctctgggtcgccaagg
ctggagacctccacggtccggacgtactcctgctga
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