KEGG   Phalacrocorax aristotelis (European shag): 142067396
Entry
142067396         CDS       T11493                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
parx  Phalacrocorax aristotelis (European shag)
Brite
KEGG Orthology (KO) [BR:parx00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:parx01009]
    142067396 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:parx03036]
    142067396 (KDM5B)
Enzymes [BR:parx01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     142067396 (KDM5B)
Protein phosphatases and associated proteins [BR:parx01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     142067396 (KDM5B)
Chromosome and associated proteins [BR:parx03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    142067396 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_Pygo PHD_UBR7-like Exo70_N PHDvar_NSD PHD_2 zf-PHD-like
Other DBs
NCBI-GeneID: 142067396
NCBI-ProteinID: XP_074972089
LinkDB
Position
21:1368288..1425528
AA seq 1521 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGG
FDVVCKERKWTKIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLCLQKPDLTSD
TKDKEYKPHDIPQRQSVQPSETCPPARRAKRLRAEATNIKTESDPPEARTHNLRRRMGCT
PPKCENEKEMHSTVKLPEKREHAGELEKDKSRVRSKKPTNAVDLYVCLLCGSGNDEDRLL
LCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEM
ADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRGGKF
KVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWS
YSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHG
VPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLNRYC
VFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKRLRDKVDKLGVTDSERVAFELF
PDDERQCLKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYKYKLGYRYTLEELYPMM
NALKMRAESYNEWASNVNEALEAKINNKRSLISFKALIEESEMKKFPDNDLLRHLRLVTQ
DADKCASVAQQLLNGKRQTRYRSGGGKCQNQLTVNELRLFVRQLYALPCVLSQTPLLKDL
LDRVEAFQQQSQKLLSVEMPSAAELQELLDVSFDFDVDLPQLAELRIRLEQARWLEDVQL
ASSDQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ
SLSSLVAAVKEIEEIPAYLPNGVALKDAVQKAKDWLQEVEALQVGGRVPVLDTLVELVTR
GRSIPVHLDYLPRLESLVSEVQAWKECASNTFLCENSPYSLLEVLCPRCDIGMLNLKRKQ
KKLKEPVPSGKKKSTKLETLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEV
KVLSSEEDAELKVCLCQKEPAAPMIQCELCRGFFHTGCVSVPNILQGPRVWLCPHCHRSE
KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLIQDKVGSG
LLYNRWQATAGQLPETNKVSQTIGAMSFSMPHDWDNRTIYLHSPFSTGHQCIPLHVISTE
LDELMMEAQLLQVSLPEIQELYQILFTKQSPVLQTEQRSSVGPTNEKNECCRGKKDGISY
MERKLKRRFERESFYDEKRARVKKMRTPKKKKLKLNHSKDLCTNKLERERERLFEMQRSS
ESHLLSSDMSFSEQEDSEDEDAICPAVNCLQPEGDEVDWVQCDGSCNQWFHQVCVGISPE
MAEKEDYICISCTGKDSQYRK
NT seq 4566 nt   +upstreamnt  +downstreamnt
atggccgagttcctgcccccgcccgagtgccccgtcttcgagcccagctgggaggagttc
gccgaccccttcgccttcatccacaagatccggcccatcgccgagcagaccggcatctgc
aaggtgcggccgccgccggactggcagcctccatttgcatgtgatgtcgacaagcttcac
tttacaccgaggatccagaggctcaatgaattagaggcccaaactcgtgtaaagctgaat
tttctggaccagattgcaaagttttgggagcttcaaggatgcaccctgaaaattccacat
gtggagaggaagatcttggatttatttcagcttaacagactagttgcagaagaaggagga
tttgatgtagtttgcaaggagagaaaatggaccaaaatagccactaggatgggatttgct
cctggcaaagccgtgggttcgcacatccgtgcacattacgagcgcattctctatccttac
aacttattccagtctggagcgagcctattgtgcttgcagaaaccagatctcaccagtgac
acaaaggacaaggaatataagccccacgatattccacagagacagtctgtgcagccatct
gaaacctgtccacctgctcgtcgagcaaaacgcctgagagcagaggcaaccaatattaaa
actgaatctgaccctccagaagccagaactcataatctgaggcgtagaatggggtgtaca
cctccgaagtgtgaaaacgaaaaggaaatgcatagcacagtgaagcttcccgagaagaga
gaacacgccggggagctggagaaagacaaatccagagtccgatctaaaaaacccactaat
gctgtggatttgtatgtgtgtctcttatgtggcagtggtaacgatgaggaccgactcctg
ttgtgcgacggctgtgatgacagttaccacactttctgtttaattccaccccttcatgat
gttcccaagggggactggaggtgtccccagtgtttggctcaggagtgtaataagcctcaa
gaagcatttggttttgaacaagcagcaagagactatactcttcgcacgtttggagaaatg
gcagatgcgttcaagtcagactattttaacatgccagtacatatggtccccaccgagctg
gttgaaaaagaattctggagacttgttagtaccattgaagaggatgtgacagtagaatat
ggagctgatattgcttcaaaggaatttggcagtggcttcccagttaggggtgggaaattt
aaagttagaccagaagaagaggaatacctcgatagtggctggaatttaaacaacatgcct
gtgatggagcagtctgttcttgctcacatcactgcagacatatgtggaatgaaattaccc
tggctatacgtaggaatgtgcttttcctcattttgttggcatatagaagaccactggagc
tattccattaactatctgcattggggggagcctaaaacgtggtatggagccccagggtat
gcagctgaacagctggaggatgtaatgaagaagcttgctccagagctatttgaatctcag
ccagatctcttgcaccaacttgtcaccataatgaacccgaatactttgatggcccacgga
gtgcctgtttatcgaaccaatcaatgtgctggagagtttgtgatcacctttccaagagct
tatcacagtggcttcaatcagggtttcaattttgctgaagctgtgaacttctgcacagtt
gactggctaccgttgggtcgccagtgtgtggaacattaccgcctgctgaaccgttactgt
gtcttctctcatgatgagatgatctgtaaaatggcttccaaagcagatgttcttgatgtt
gtggtagcatctacagttcaaaaagacatggctattatgattgaagatgagaagaggttg
cgtgacaaggttgataaactgggagtgactgactcagagagagtggcttttgagctgttt
cctgatgacgagcgacaatgcctgaagtgtaaaaccacctgtttcatgtctgctgtttat
tgtccatgtaaacctggattattggtatgcttgtaccatgttgaggatctctgttcctgt
cccacctacaaatataaactggggtaccgctacaccctggaggaactctacccaatgatg
aacgcactaaagatgcgtgcggaatcatacaacgaatgggcttccaatgttaacgaagct
ctggaggcaaaaattaacaataaaagaagtctcatcagttttaaggctttgatagaagaa
tcagaaatgaaaaagtttccagacaatgatctgctgcgacacctcagactagttacgcag
gacgcagacaaatgtgcctcagttgcacagcagcttcttaatggcaaaagacaaaccagg
taccgctccggaggagggaagtgtcaaaatcagctgactgtgaatgagctccggttgttc
gtgaggcagctgtatgctctgccctgtgtcctcagtcagacaccgttactgaaggatctt
cttgatcgtgtggaagcttttcaacagcaaagccaaaaactcctttctgtagaaatgccc
agtgctgcagaacttcaggagctgttggatgtcagctttgacttcgacgttgatctaccc
caactggctgagctgcggatacgtctggaacaggcacgctggctcgaggatgtgcaactg
gcttcctcagaccaaaactctcttactttagatgatatgagacgtcttatagactcaggt
gttggactcgctccctacccagcggttgagaaggcaatggcgaagctgcaagagctcctt
actgtatctgaacactgggatgacaaagccagaaatctgataaaggccaggccacggcag
tcgctgagcagtcttgtagcagcagtgaaagaaatagaggagatcccagcctatctcccg
aacggcgtcgcactgaaagacgcggtgcagaaggccaaagactggctgcaggaggtggaa
gctctgcaggttggaggacgtgtgcctgtactggacacactggtggaacttgtcacaaga
ggtcgatctattcccgtgcatctggactacctgccgaggctggagtccttggtgtcggaa
gttcaggcgtggaaggagtgcgcatctaacacgtttctgtgtgagaactccccttattct
cttctggaggtgttgtgtccccggtgtgatattggaatgctgaatctgaagagaaagcag
aagaagttgaaggagccagtgccgagtggaaagaagaaaagcactaagctagagactctg
agtgacttagaaagagctctctccgagagcaaagatactgcgtccgcaatggcgacgctt
ggggaagcccgattaaaggagatggaagctttgcgttctctgcgagccgcaaacgaagtg
aaggtgctgtccagcgaagaggatgcagaactcaaagtctgtctgtgccagaaggagccg
gctgctccgatgatccagtgtgaactctgcagagggttcttccataccggctgtgtttcg
gtgcccaacattttgcagggacctcgtgtgtggctctgtccacactgtcatcgatcagaa
aagccacctttagaaaagatcttaccactgctggcctccttgcagcgtatccgtgtgagg
cttcccgagggggatgccttgcggtatatgatcgagagaactgtgaactggcagcacaga
gcacaacaaatgttatattcagggaatctaaaacttatacaagacaaagttggctcagga
ttgttgtacaacagatggcaagccacagcaggccaattgccagagacaaacaaggtttcc
cagacaattggagcgatgtcattctccatgcctcacgactgggataacagaaccatatat
ttacattctccattttctacaggacatcagtgcatcccacttcatgtcattagcacagag
ctggatgagctgatgatggaagcccagctgctacaggtttctctgcctgaaatacaggag
ctgtaccagatcctattcacaaagcaaagccctgttctgcaaacagagcagaggtcatcc
gttggaccgacaaatgaaaagaatgagtgttgccgagggaaaaaggatgggattagttac
atggagagaaaactaaagcggcgttttgagagagagagcttctatgatgagaaaagagcg
agagtaaaaaaaatgagaactcccaaaaagaagaaactgaaactgaatcactcaaaggat
ctctgcactaacaaactggagagagagcgggagcgtctctttgagatgcagcgttccagt
gaaagccacttgctttcctcagacatgtcattctctgagcaggaggactctgaggatgag
gatgccatctgccctgctgtgaactgcctccagccggagggagatgaggtggattgggtc
cagtgcgacggcagctgcaaccagtggttccaccaggtgtgtgtgggcatctccccagaa
atggcagagaaggaggactacatctgcatcagctgcactgggaaggactctcaatatcgg
aagtaa

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