Phalacrocorax aristotelis (European shag): 142067608
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Entry
142067608 CDS
T11493
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx04270
Vascular smooth muscle contraction
parx04625
C-type lectin receptor signaling pathway
parx04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
142067608 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
142067608 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
142067608 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142067608 (ARHGEF12)
Membrane trafficking [BR:
parx04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
142067608 (ARHGEF12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
DUF3967
AAA_23
Motif
Other DBs
NCBI-GeneID:
142067608
NCBI-ProteinID:
XP_074972520
LinkDB
All DBs
Position
22:3448482..3531066
Genome browser
AA seq
1544 aa
AA seq
DB search
MSGTQSTITDRFPLKKPTRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQISLADSEVDLATFGHMSPIMTSPHSP
GTSGNAERITSPVLVGEENNIVHSQKVEILRKMLQKEQERLQSLQEEYSRSPNTRVLKEI
QETKKHIPQLQEQLSKATGCTQDGVLYSRSVTESLQISEVEAESGDCVSKLDYSGDSPSR
PNSDIADSPRSGLKERIYPDESPEKSEVQDNDSQSSVGSPLSRVGPQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPDEISLELDRRRPELLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTKLDAERVRDRNAVEKERACAEQIIAKIEEVLMTSQPLEEDKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEMQKPRHSKHLTTASSVSPEPPDSSKMRQSGSSSDGTDVPYPP
ANPMSPLAMGPFSSPEGSKDSETGLKQTGEAPPANDCMDGTPRTPNNTFEFPSPLENLQE
EEGESERMVDMGTPKPFRKMDSVGFTDVQSEDELYDFDMDMDPPNWQQLVSREVLLGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSDKRKIFSNLEDILGLHI
VLNDHMKAVRKRNETSVIGQIGEDLLSWFSGAAEEKLKHATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELSEEKEKVKKA
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLIWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSTRRVI
PLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLILNAQSSSPIMSEKSK
VESLLVSERQFDKVQQADLTLKDSSACYEHTTTSLPSVSEGQWALDALRNLGLLKQLLVQ
QLGFSEKGILEDRQRFPRFRTVSQEAQTESGSEPGLQHSDNNKFHQSGTYRMLPRTGTNE
STASYGLRTSAESPAAGDAMQLIVRDPRSSSNLAIDHMSMNLEMSTTELDGVGADESGEH
FFDAREAHSDENPSESELMERKEEDDVQIRISGNYLILDGYGTVQESSTDEEVSSLVLQY
TAGGRASLDSAQQQPLSPRDTQSDGGSSPFAEEMMASRWGGVEESCSFVASPHFSIESRV
QMMQYIQKIEDDLEKLKEVEEDYTILRRQGLAGSASTGEHSDKS
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaacctacaagacac
ggcagcattctgagcagagagtctccagctgacaagaaacagaaggttgaacgctgcagt
agtacgcacgactttgatccgacagatagctcctccaagaagacaaagtctagttcggag
gagagtagatcggagacgtatggtcttgttcaacggtgtgttgttatccaacgggatgaa
aacggatttgggctgacagtcagcggagacaatccagtcttcgtgcagtccgtcaaagaa
gatggagcagccatgcgggctggagtgcaaacaggggatagaattatcaaggtgaatggc
actcttgtaactcactcaaaccatctggaggtggtaaagctgatcaagtcgggttcctat
gtagctctcactgttcaggggcgcccaccagggtcgccccagatttcattagctgattct
gaagtggatctggcaacatttgggcatatgtctcccatcatgacatctccccattcacct
ggcacatcaggaaatgcagaaaggattactagcccagtgcttgttggggaggagaataat
attgtccacagccagaaggtggagattctgagaaagatgctacagaaagagcaggagcgg
ctgcagtctctgcaagaagagtatagccgatcacccaacacaagagtgctcaaagagata
caggaaacgaagaagcacattcctcagctgcaagagcagttgtccaaagccacaggctgt
actcaggatggagtcttgtactccaggtctgtgacggaatcgctgcagatcagtgaagtg
gaggcagagagcggggattgtgtgagcaaactggattacagtggtgacagcccctcccga
ccgaacagtgacattgctgatagtcctcgcagtggcttgaaggagcggatttatccagat
gagagcccagaaaagagtgaggttcaagataatgattcccagtccagtgttggaagtcct
ttatccagagtggggcctcagatcattggagcagaggatgacgactttgacactgaacag
gagcagattaatggacaatgcagctgtttccaaaacattgagctcctgaaatctcgccca
gctcacctggctgttcttctgcatcatgtggtgtcccagtttgaccctgcagcattgtta
tgctacctttacacagacctgtacaagcagaccaactccaaagagactcggcgtgtcttc
cttgagttttaccagttcttcttggaccgagctgcaaatctaaaagttcccgtcccagat
gaaatctccctagaactagatagaagaaggccagaactccttcctgaagagcttcatcgc
cagtttatacaaactatgcaagataaagtctgtccagaagttcaaaggaatctggaagat
tttaggcagaaacgtagtatgggattgaccctggcagaaggagagctaaccaagctggat
gcagaaagagttcgtgaccggaatgcagtggagaaggaaagagcatgtgcagaacagatt
attgctaaaattgaggaagtgttgatgacatctcagcctttggaagaagacaagagttcc
acaatgcagtatgtgattcttacttacatgaaacacctgggagtcaaagttaaagaacct
cgtaacctggagcagaagcgtggccgtattggtttcttgccaaagatcaagcaaagtatc
aagaaggagaaagaaggagaggaaaaaggaaagagaagaggctttcctaatattctgggc
ccaccaaggagaccgagtcgacatgatagcagtgcaattggcagagccatggaaatgcag
aagccccgccattcaaagcacttaactacagcgtcttctgttagcccagagccaccggat
tctagcaagatgcgccagagtgggtcctccagtgatggaacagatgtgccatatccgcct
gccaacccaatgtctcctttggcaatgggtcccttttcctctccagagggaagcaaagat
agcgaaacaggtttgaagcagactggagaagctccacctgccaatgactgtatggatggc
actccccgcacacctaataatacctttgaattcccatctcctttggaaaacttgcaggag
gaggagggagaatcagaaagaatggttgacatgggaacaccaaagccttttcgcaagatg
gacagtgttggtttcacagatgtacaaagtgaagatgagctatatgattttgacatggac
atggaccctcccaactggcagcaacttgtgagccgagaagtgttgctggggctgaaaccc
tatgaaatcaagcgccaagaagtgattaatgagttgttttacactgagagggctcatgtt
cgcacgctgaaggttctgcataatgtcttctaccagcgtgtcacccgggaagggatcctg
aactccagcgacaaacggaaaatcttctccaatctggaggatattcttgggcttcatatt
gtattgaacgatcatatgaaagctgtccgaaaaaggaatgagacttctgttattggccaa
attggggaagacctgctttcctggtttagtggagcagcagaggagaagctgaaacatgca
actgccaccttctgcagtaaccagccctttgctctagaggtcatcaagtcacgccagaag
aaggactctcgcttccagacttttgtgcaggatgctgagagtaatccactgtgtcgccgg
ttgcagctgaaggatatcattcccacagagatgcagaggttgactaagtacccccttctg
ctggataacattgcaaagtacacagaactgtctgaagagaaagagaaagtgaagaaagca
gcagatcattgtcgtcagatccttaaccacgtgaaccaggctgtcaaagagtcagagaac
aagcagcacttggaagattatcagcgtcgtcttgacctgtcttacttgaagcagtccgag
gatcccatgatggatgagttcaggaacttggatctaacaaagagaaaaatgcttcatgaa
ggacctctaatttggaaggttaatcgtgacaaaactattgatctctacactctgcttctg
gaggacattctggtgctgttgcagaaacaagatgataaactggtactgaagtgtcacagt
aaaatcttggcatctacagctgatagtaaacacaccttcagtcctatcatcaaattgaac
accgttctggttcgtcaggtggcaacagataacaaagctttcttcgtcatctccatgtca
gaaaatggcgctcatatttatgaactggtggcacagactgtttcagaaaagaatgtatgg
caggaccttatagctcagatggcagggactgtaaaaatgggcagtaccagaagagtgatt
ccattaccacagtcaggacctggcgaagaagagcgtgaagaagaggagcagcagaagctc
aaagagcagcatgacattcctgccagtagtctacagagtccagataaagatttgggcctt
gaatctccattaatactaaatgctcagtcgtcttcgcccatcatgtctgaaaagtccaag
gtagaaagtcttcttgtgtcagaaagacagtttgataaagtgcagcaggcagacctgaca
cttaaagattcttctgcatgctatgaacacacaaccaccagtttaccatcagtatccgaa
gggcagtgggcactggatgcattaaggaacttgggcttgctgaaacaattgttggtacag
cagcttggcttttctgagaaggggatccttgaagaccggcagcgctttcccaggtttagg
accgtttctcaagaagcccaaacggagagtggaagtgagcctggactacagcactctgac
aataacaaatttcaccagtctggaacatacagaatgcttccaagaaccggaactaatgag
tccacagctagttatggcctccggacttcagctgaatcgccagcagcaggggatgccatg
cagctgatagtgagagaccccaggtcaagtagtaacttagcaatagaccacatgagtatg
aatctggagatgtctaccacagagctggatggggtgggtgctgatgaaagtggggagcat
ttttttgatgctcgagaagctcacagtgatgaaaatccatctgaaagtgaactaatggaa
aggaaggaggaagatgatgtgcaaatacggatctcaggaaattatttgatccttgacgga
tatggaacagtacaggagagctccacagacgaggaggtatcgtccctagttctccagtac
actgcaggtggccgcgcctctttggactctgcacagcagcagccactttccccacgggac
acacagtcggatggaggaagctccccgtttgctgaggagatgatggcctcacgctggggg
ggagtggaagagtcctgctcgtttgtagcaagccctcacttttctatagagtcacgtgtg
cagatgatgcagtatattcagaagatagaggatgaccttgaaaagttaaaggaggttgaa
gaagactacaccattctccgacgccaagggctggctggatcagcctccacgggagagcac
tcagacaaaagctag
DBGET
integrated database retrieval system
