Phalacrocorax aristotelis (European shag): 142067643
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Entry
142067643 CDS
T11493
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
parx04514
Cell adhesion molecule (CAM) interaction
parx04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
142067643 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
142067643 (NCAM1)
04517 IgSF CAM signaling
142067643 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
parx04131
]
142067643 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
parx04515
]
142067643 (NCAM1)
04090 CD molecules [BR:
parx04090
]
142067643 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
parx00536
]
142067643 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
parx00537
]
142067643 (NCAM1)
04091 Lectins [BR:
parx04091
]
142067643 (NCAM1)
Membrane trafficking [BR:
parx04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
142067643 (NCAM1)
Cell adhesion molecules [BR:
parx04515
]
Immunoglobulin superfamily
NCAM1/2
142067643 (NCAM1)
CD molecules [BR:
parx04090
]
Proteins
142067643 (NCAM1)
Glycosaminoglycan binding proteins [BR:
parx00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
142067643 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
parx00537
]
Others
142067643 (NCAM1)
Lectins [BR:
parx04091
]
I-type lectins (Siglecs)
142067643 (NCAM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
C2-set_2
Ig_6
Ig_MYOM1
C1-set
C2-set_3
V-set_CD47
Fn3_ROS1
Ig_PDGFR_d4
Pur_ac_phosph_N
Muramidase
Motif
Other DBs
NCBI-GeneID:
142067643
NCBI-ProteinID:
XP_074972597
LinkDB
All DBs
Position
22:complement(1682539..1834583)
Genome browser
AA seq
1129 aa
AA seq
DB search
MKGINNPSLCHCRPSMQQLSKVQKRSIASLQVDIVPSQGEISVGESKFFLCQVAGEAKYK
DISWFSPNGEKLTPNQQRISVVRNDDFSSTLTIYNANIDDAGIYKCVVSSVEEGDSEATV
NVKIFQKLMFKNAPTPQEFKEGDDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS
NNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPSVRARQSTMNATANLSQS
VTLACDADGFPEPTMTWTKDGDPIEQADDEEKYSFNYDGSELIIKKVDKSDEAEYICIAE
NKAGEHDATIHLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWRTSTRNISN
EEKASWTRPEKQETLDGRIVVRSHARVSSLTLKEIQYTDAGEYICTASNTIGQDSQAMYL
EVQYAPKLQGPVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPS
ASYLEVTPDSENDFGNYNCTAVNRIGQESSEFILVQADTPSSPSIDRVEPYSSTAQVEFD
EPEATGGVPILKYKAEWRALGEGEWHSRLYDAKEANVEGVITITGLKPETTYSVRLSAVN
GKGVGEISLPSDFKTQPVREPSAPKLEGQMGEDGNSIKVNVIKQDDGGSPIRHYLIKYKA
KHSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVIAENQQGKSKPAHYAFRTSAQPTVIP
ASTSPTSGLGTAAIVGILIVIFVLLLVAVDVTCYFLNKCGLLMCIAVNLCGKSGPGAKGK
DMEEGKAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPEHPADTAATVED
MLPSVTTGTTNSDTVTETFATAQNSPTSETTTLTSSIALPATAIPDSNSMSPGQATPAKG
AATSVSSPPPSSTPKVAPLVDLSDTPSSAPATNNLSSSVLSNQGAVLSPSTVANVAETSK
AVAGNKPAAPSPANLTSPPAPSEPKEEVSSTKSPEKEAVQPSTVKSPTETTKNPSNLKSE
AASGSTTNPSQNEDFKMDEGTFKTPDIDLAKDVFAALGTTTPARVTSGQAHELASSTADS
SVPAAPAKTEKIPVEDKPEVQATETKTPPAEVKMVPNEATQTNENESKA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcattaataaccccagcctatgccactgccgtcccagcatgcagcaactctca
aaagtgcagaagaggtccattgcctctcttcaagtggacattgttccaagccagggggag
atcagtgttggagaatctaaattcttcctatgtcaagtggcaggggaggccaaatacaaa
gacatttcctggttttcccctaatggtgagaagctgacgccgaaccaacagcgcatctca
gtggtgcgaaatgacgacttctcctccactctcaccatctacaacgccaacattgatgat
gctggcatctataagtgtgttgtcagtagcgtggaggagggagactccgaggccaccgtc
aatgtgaaaattttccaaaagctgatgttcaagaatgctcccactcctcaggaattcaag
gaaggggatgatgctgtgattgtgtgtgatgtggtcagctcactgcctcctaccatcatc
tggaagcacaaaggcagggatgttatcctaaaaaaagatgttcggtttatagtcctgtcc
aacaactacctgcagatccggggaatcaagaaaacagatgaagggacataccgctgtgag
ggccggatcttggctcgtggggagatcaacttcaaagatattcaggtcatcgtaaatgta
cctccttctgtgcgcgccaggcagagcacgatgaacgccactgccaacctcagccagtct
gtcaccttagcatgtgatgctgatggctttcctgagccaaccatgacgtggaccaaggat
ggagaccccatagaacaggccgatgatgaagagaaatacagttttaactacgatgggtct
gagctcatcatcaagaaggtggataagagtgacgaagcagaatacatctgcatcgctgag
aacaaggctggcgagcatgatgccaccattcatctcaaagtttttgcaaaacccaaaatc
acctatgtggagaataaaacggccatggagctggaggatcagattacgctgacctgtgag
gcatctggggacccaatcccttccatcacctggagaacttccaccaggaacatcagcaat
gaagagaaggcttcgtggacccggcccgagaaacaagagaccctggatgggcgcatcgta
gtacgtagccatgcccgggtgtcgtccctgactctcaaagaaattcagtacactgatgcc
ggagaatatatatgcacagccagcaacaccatcgggcaggattcccaagccatgtacctt
gaagtgcagtatgcccccaagcttcagggccctgtggctgtctatacgtgggaaggaaat
caagtgaacatcacctgtgaggtatttgcttaccctagtgctgtcatctcctggttccgg
gatggacagctgcttcccagctcaaactacagcaacatcaagatctacaacactccgtca
gcaagctacctggaggtgacaccagactctgaaaatgactttgggaactataactgcact
gctgtgaaccgcattggtcaggagtcctcagagttcattcttgtgcaggcagatactccg
tcctctccttccattgacagagtggagccctattccagtactgcccaggtggagttcgat
gagcctgaagctaccggtggggtgcccatactcaagtacaaagcggagtggagggcactg
ggagagggagaatggcattcaaggttgtatgatgcaaaagaagcaaatgtggagggtgtg
atcactatcactggcctgaaacctgaaacaacctactctgtgagactgtctgcagtcaat
ggcaagggtgtgggtgagattagcctgccatctgatttcaagacacaaccagttcgggaa
cccagcgcacccaaactggaaggtcagatgggagaagatggaaactccattaaagtgaat
gttatcaagcaggatgatggtggctccccaattagacattatctgatcaaatacaaagct
aagcattcctcagaatggaaaccggagatcagacttccgtctggcagtgaccatgtcatg
ctcaagtccctggactggaatgctgaatatgaggtttatgtgatagctgaaaaccagcaa
gggaagtccaagccagctcactatgctttccgaacttctgctcagcctacagtcatccca
gccagcactagccctacatcaggccttgggactgctgccatcgtaggcattctcattgtt
atctttgtgctgctcctggtggctgtggatgtcacctgctacttcctgaacaagtgtggc
ctgctgatgtgtattgctgtcaatttatgcggcaaatctggtccaggagccaagggcaaa
gacatggaagagggcaaagccgccttctcgaaagatgagtccaaggagcctattgtggag
gtgcggactgaagaggagcggacccccaaccacgatgggggaaaacacacagagcccaat
gagaccaccccgctgacggagccagagcaccctgccgatactgcagctactgttgaggac
atgctgccttctgtaactacgggcaccactaactctgacactgtcactgaaacttttgcc
actgctcagaacagccccaccagtgagaccactacgctgacctccagtattgccctgcca
gccacagccattcctgactcaaactccatgtcgcctggccaggctactccagccaaaggg
gcagccacctcagtctcttcaccaccaccctcctccacccccaaggtggcgccccttgtt
gatctcagcgataccccaagctctgctccagctactaataatttgtcttcaagtgtcttg
tccaaccaaggtgcagtgctcagccccagcactgtggctaacgtggccgaaacatccaaa
gcggtagctggtaacaagccagctgccccaagccctgcaaacctcactagccctccagct
ccatcagagcccaaggaggaggtctcaagcaccaagagccctgaaaaggaagctgtgcag
cccagtacagtgaagagcccaacagagacaaccaagaacccaagtaatctgaagagcgag
gctgcttcaggcagcaccacaaacccctcacagaatgaggactttaaaatggacgaaggg
accttcaagacaccagacattgatcttgcaaaggatgtttttgcagctcttggcactact
actcctgccagggtgactagcgggcaagctcatgagcttgcttcttccactgcagacagc
tctgtacctgctgcacctgcaaagaccgagaaaatcccagtagaagacaaacctgaagtg
caagcaacggaaactaagacacctccagcagaagtcaagatggtccccaatgaagccaca
caaacaaatgaaaatgagagcaaagcatga
DBGET
integrated database retrieval system
