Phalacrocorax aristotelis (European shag): 142067654
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Entry
142067654 CDS
T11493
Symbol
DDX6
Name
(RefSeq) putative ATP-dependent RNA helicase DDX6 isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
parx Phalacrocorax aristotelis (European shag)
Pathway
parx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142067654 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parx03019
]
142067654 (DDX6)
03036 Chromosome and associated proteins [BR:
parx03036
]
142067654 (DDX6)
Enzymes [BR:
parx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142067654 (DDX6)
Messenger RNA biogenesis [BR:
parx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
142067654 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
142067654 (DDX6)
Chromosome and associated proteins [BR:
parx03036
]
Eukaryotic type
Gene silencing
piRNA pathway
142067654 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142067654
NCBI-ProteinID:
XP_074972621
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Position
22:complement(73322..88115)
Genome browser
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQ
SMTTAIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHV
QMIVLDEANKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctatccagtcagaatgggcag
ttgagaggccctgtaaaacccagcgggggcccaggaggtggaggcacacaaactcagcaa
cagatgaaccagctgaaaaatgccaacacaatcaataacggcactcaacagcaagcacag
agtatgaccaccgctattaaacctggtgatgactggaagaagactttaaaactccctcca
aaggatttgagaatcaaaacttcggacgtgacctccacaaaaggaaacgagtttgaagat
tactgtttgaaacgggagttgctgatgggaatttttgaaatgggctgggaaaaaccatct
cctatacaggaggagagcatccccattgctttatctggtagggatatcttggctagagcg
aaaaatggaacaggcaagagtggagcctacctcattcctttacttgaacggctagactta
aagaaggacaatatacaagcaatggtgatcgttcccacccgtgaactagccctgcaggtc
agtcaaatctgtatccaagtcagcaaacacatgggaggtgccaaagtgatggcaacaacg
ggaggaaccaatttgcgagatgacatcatgaggcttgatgatacagtgcatgtggtgata
gctacccctgggagaattctcgatctcatcaagaaaggagtagcaaaagtcgagcatgtc
cagatgatagtattggatgaggcaaataagctgctgtctcaagattttgttcaaataatg
gaagacattattctcacgctacctaaaaacagacagattttgctctactcggccactttc
cctttgagtgtacagaagttcatgaattcccatttgcagaaaccctacgagattaacctg
atggaggagctgaccttgaagggagttacccagtactatgcctatgtcactgagcgtcag
aaagtgcactgcctcaatacactgttttccaggctccagattaaccagtcgatcattttc
tgcaactcctctcaacgggtggaattgctagccaaaaagatctcccagctgggctattcc
tgcttctatatccatgctaagatgaggcaggagcaccgcaatcgtgtgttccacgatttc
cgaaatggcttatgccgcaatcttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaatgtggtgataaacttcgatttcccaaagctggcagagacttatctccat
cgcattggcagatcaggtcgctttggtcaccttggcctggccatcaacttgatcacctat
gatgatcgattcaacctgaaaagtattgaggagcagttgggaactgaaattaaacccata
ccaagcaacattgacaagagcctgtatgtggcagaataccacagtgaacctgtagaagat
gagaaacagtaa
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