Muribaculum intestinale: A4V02_00415
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Entry
A4V02_00415 CDS
T04438
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pary
Muribaculum intestinale
Pathway
pary03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pary00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V02_00415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pary03019
]
A4V02_00415
03009 Ribosome biogenesis [BR:
pary03009
]
A4V02_00415
Enzymes [BR:
pary01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4V02_00415
Messenger RNA biogenesis [BR:
pary03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4V02_00415
Ribosome biogenesis [BR:
pary03009
]
Prokaryotic type
rRNA helicases
A4V02_00415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
ANU62359
UniProt:
A0A1B1S6E5
LinkDB
All DBs
Position
128153..129940
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AA seq
595 aa
AA seq
DB search
MTKTFEQLGVSEPLRRAIEEMGFETPMPVQEMVIPHLLNEDGDVVALAQTGTGKTAAFGL
PVLQRTDTHVNAPQALIIAPTRELCLQISSDLADFSKYMPSLKVLPVYGGSSIESQIRSL
RQGVQIIVATPGRLIDLINRGVVNLTEVHTVILDEADEMLNMGFVDDINDILTHVPDNRK
MLMFSATMPKEIARIAQRFMNNPQEFVVGVKNSGAENVRHIYYMVHARDKYLALKRIADD
NPNIYAIVFCRTRKETQEIADWLIQDGYNADSLHGELSQQQRDMVMKKFRDHVLRILVAT
DVAARGLDVSDLTHVINYGLPDDVATYTHRSGRTGRAGKTGISIAIIHSRERGKLRDIEK
RIGKTFERKDVPTPDHIIEKQLYNLADRLERVQVDDDQISRYFTGVERKLGWLSQQDLLK
RILSLEFNRLLDYYKDAPKIDYIDEKPAGRGRKDKDKTISPKEKDRRTADRGMARIYVNA
GKSDGFFAGNLIDILNHTVSGQRVDVGRIDLMPGYSLFDVKKSDARRVVEALTGHEFVGN
KLYAEIADPEKDYTHASRRKKEAPSGDGAPRAGKPARRKPAGNYDKFIKKGKKHK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacatttgaacaattaggcgtaagtgaacccctgcgccgcgctatcgaagaa
atggggtttgaaaccccgatgcctgtacaggagatggtgataccccatctgctgaatgag
gatggcgacgttgtggcgctcgcacagaccggcacgggcaagactgccgcattcggactc
ccggtgctgcagcgcaccgacactcatgtcaacgctccgcaggcgctcataatagcgcct
acacgcgaactgtgtctgcagatcagcagcgatctggccgacttctccaaatacatgccc
tcccttaaggtgctcccggtgtatggagggtcaagtatagagagccagatacgctcgctt
cgacagggtgtgcagattatcgtggctacccccggccgacttatcgacctcatcaaccga
ggtgtagtaaacctgaccgaggtgcacacagtaatcctcgacgaggccgacgagatgctc
aacatgggattcgtcgacgatatcaacgacatcctcacccatgtgcccgacaaccgcaag
atgctgatgttctctgccaccatgcccaaggaaatagcccgtatcgcccagcggttcatg
aacaatccgcaggaatttgtggtaggtgtaaaaaactccggggccgagaatgtgcgccat
atatactatatggtacatgcgcgcgacaagtacctcgccctgaagcgtattgccgacgac
aatcccaacatatacgctatcgtgttctgccgtacacgtaaggagacacaggagattgcc
gactggctcatacaggacggctacaatgccgactctctccacggagagctctcgcagcag
cagcgcgatatggtgatgaagaaatttcgcgatcatgtgttgcgcatacttgtcgccacc
gatgtagccgcacgcggcctcgacgtgagcgaccttactcatgtcattaattacggactt
cccgatgatgtggccacatacacccaccgctcggggcgtaccggacgcgccggaaagacc
ggcatatcgattgccataatccattcgcgcgagcgcggcaaactgcgcgacatagagaag
cgcataggcaagaccttcgaacgcaaggatgtgcctactcccgaccatatcatagagaag
cagctctacaatcttgccgaccgtctggagcgcgtgcaggtcgacgacgaccagatatcg
cgctacttcaccggagtggagcgcaaactcggatggctgtcgcagcaggatttgctcaaa
cgcatactgtcgcttgagttcaatcgtctgctcgactactacaaggatgcgcctaaaatc
gactatatcgacgagaagcctgccggacgtggacgcaaggataaggacaagacgatatct
cccaaagaaaaagaccgccgtaccgccgacaggggcatggcacgcatatatgtcaatgcc
ggaaaaagcgacggattctttgcaggaaacctcatcgacatccttaaccatacggtctcc
ggtcagcgtgtcgacgtgggccgtatcgacttgatgcccggctactcgctgttcgacgtc
aagaagtccgatgcccgccgggtggtcgaggctcttacgggacatgagtttgtaggcaac
aaactgtatgcagagattgccgatcccgaaaaggactatacgcatgcgtcgcgccgaaag
aaagaggcgccatcgggtgacggagcgccgcgagccggtaagccggcacgacggaaaccg
gccgggaactatgataaatttattaagaaaggtaaaaaacacaagtaa
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