Muribaculum intestinale: A4V02_03410
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Entry
A4V02_03410 CDS
T04438
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pary
Muribaculum intestinale
Brite
KEGG Orthology (KO) [BR:
pary00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pary03016
]
A4V02_03410
Enzymes [BR:
pary01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
A4V02_03410
Transfer RNA biogenesis [BR:
pary03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
A4V02_03410
Prokaryotic type
tRNA splicing ligases
A4V02_03410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ANU62862
UniProt:
A0A1B1S7T7
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All DBs
Position
869921..871120
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AA seq
399 aa
AA seq
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MIITGKTTSAEIFTDNIEQSALDWVIELCDHPAMEGVPIVQMPDVHAGNSCNVGTAYPIG
MYVNPDHVGVDIGCTISMHRLSCAASPDDFPLLDHRIREAIPTGTDICPKNSLNEKELFR
FLNSQYQKARSAAPELINEAPRIDARFITDFCRRIKLQEGIFYKSLGTLGGGNHFIEYGE
DAESGDTWLTIHCGSRNLGVKVANHWRNIAQNPKRAKYIGCLWGDALCGYLSDMIIAQAY
ALYNHQIIRDRIFAILKKLCKAKCVESIFTTHNYISVTDDVPMLRKGAIDASEGRKIAIP
FNMRDGIAICIGKGNEQWLNTAPHGAGRIMSRAQAKKQISMDDFQASMTGIYSSSVCSGT
LDESPMAYKPACEILELIRPTVEVVAMIKPKLNIKDNGE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgataattacaggaaaaacgacatcggctgagattttcaccgataatatagagcagtcg
gcactcgactgggtaattgaattgtgcgaccatccggcaatggagggcgtgcctatagtg
caaatgcccgacgttcacgccggcaactcatgcaatgtaggcacagcctatccgatagga
atgtatgtcaatcccgaccatgtcggagttgacattggttgcactatctcgatgcaccgt
ctttcgtgtgccgccagccccgacgactttccgctgctcgaccaccgtattcgcgaggca
atcccgacaggcaccgatatttgtccgaagaactcactcaatgagaaagagctgtttcgc
tttctgaactctcaatatcagaaggcccgctcggctgctcccgaacttatcaatgaggcg
cctcgcatagatgcacgattcatcacagacttctgccgtcgcatcaaacttcaggagggc
atcttctacaaaagtctcggcacgctcggaggcggaaaccatttcattgagtatggagaa
gacgccgaatccggagacacttggctgaccattcactgtggctcgcgaaatcttggagtg
aaggtagccaaccattggcgcaatatagcccaaaatcctaaacgggcaaaatacatcggc
tgcctttggggcgatgcactgtgtggctatctctcagatatgattatagcccaggcctat
gcactctataatcatcagattatccgtgaccgcatattcgctattctcaaaaaactgtgt
aaggctaagtgtgttgaatctatctttaccacccataattatatatcggtaacggacgac
gtgccaatgttaagaaaaggagcgattgacgcatcggaaggcaggaagattgcaattcca
ttcaatatgcgcgacggaatagcaatctgcatcggaaaaggtaatgagcaatggctcaac
acagctccacacggggccggacgcattatgagccgcgcccaagccaaaaaacaaatttca
atggacgattttcaggcttcaatgacaggcatctattcatcatcggtatgctcaggcaca
cttgatgaatctccgatggcatacaaacccgcctgtgagatactcgaacttattcgaccg
acagtagaggtagtcgccatgataaaacctaaactcaatatcaaagacaacggagaatga
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