Muribaculum intestinale: A4V02_12230
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Entry
A4V02_12230 CDS
T04438
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pary
Muribaculum intestinale
Pathway
pary03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pary00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4V02_12230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pary03400
]
A4V02_12230
Enzymes [BR:
pary01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4V02_12230
DNA repair and recombination proteins [BR:
pary03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4V02_12230
RecFOR pathway proteins
A4V02_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
Mg_chelatase
AAA_16
TIP49
NB-ARC
nSTAND3
TsaE
AAA_18
AAA_14
NTPase_1
Sigma54_activ_2
Bac_DnaA
Rad17
AAA_33
NPHP3_N
AAA_PrkA
RNA_helicase
AAA_28
NACHT
bpMoxR
AAA_17
DUF815
ABC_tran
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ANU64409
UniProt:
A0A1B1SC91
LinkDB
All DBs
Position
2953566..2954597
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AA seq
343 aa
AA seq
DB search
MDNDFDIRDSSLSSDRTENDIERALRPSGFSAFSGQEKIVENLRVFVAAAKMRGESLDHV
LLHGPPGLGKTTLSQIIANELGVGFKITSGPVLDKPGDLAGLLTSLEENDVLFIDEIHRL
SPVVEEYLYSAMEDYRIDIMIDKGPGARTVQLTLAPFTLIGATTRSGLLTSPLRARFGIN
CHLEYYDHEVLERIVLRSAGLLGVKCTAEAAHEIALRSRGTPRVANRLLRRVRDFAQVKG
RGIIDPEIARYALEALNIDRYGLDEIDNKILTTIIHKFRGGPVGLTTIATALGEDAGTVE
EVYEPFLIKEGFIKRTPRGREVTMLAYTHLGISPDTDAMSLFS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgacttcgacatacgtgactcatcgctctcgtccgaccgtacggaaaatgat
atcgaacgtgcgctgcgcccctcggggttcagcgctttcagtggtcaggagaaaatcgtg
gagaatctccgcgtgtttgtcgccgccgccaagatgcgtggcgaatcgcttgaccatgtg
ctcctgcacggccctcctggccttggcaagacaacactgtcgcagattatcgccaacgag
cttggtgtcggattcaagataacttcgggcccggtgctcgacaaaccgggcgatcttgcc
ggcctgcttacctcgcttgaggaaaacgatgtgctctttatcgacgagatacaccgtctg
agccccgtggtcgaggagtatctgtactcggctatggaggattaccgtatagatataatg
attgacaaagggccgggtgctcgcacggtgcagcttactcttgctccttttacacttatc
ggtgccactacccgcagtggtctgctcacatcgccgctgcgtgcgcgcttcggcataaac
tgccatctggagtactacgaccacgaagtacttgagcgtatagtgttgcgctcggccgga
cttctcggagtcaagtgtacggccgaggcagcccatgagatagcgctgcgcagccgcggc
acaccacgtgtggccaaccgtctgttgcgccgtgtgcgcgatttcgcgcaggtaaaaggg
cgcggtatcatcgaccctgaaatagcccgttatgctctggaggcattaaatatcgaccga
tacggtctcgacgagattgacaacaagatacttacgactatcatacacaagtttcgcggc
ggccctgtcggcctcacgactattgccacggcgctcggcgaagatgccggcactgtcgag
gaggtgtatgagccgttcctcatcaaagagggttttataaagcgcacgccgcggggcaga
gaggtgacgatgcttgcatacacgcatcttggcatcagtccggacaccgatgcaatgtcg
ctgttctcatag
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