Parasaccharibacter sp. TMW 2.1888: DTQ13_00665
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Entry
DTQ13_00665 CDS
T08091
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
parz
Parasaccharibacter sp. TMW 2.1888
Pathway
parz03030
DNA replication
parz03430
Mismatch repair
parz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DTQ13_00665
03430 Mismatch repair
DTQ13_00665
03440 Homologous recombination
DTQ13_00665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parz03032
]
DTQ13_00665
03400 DNA repair and recombination proteins [BR:
parz03400
]
DTQ13_00665
Enzymes [BR:
parz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DTQ13_00665
DNA replication proteins [BR:
parz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DTQ13_00665
DNA repair and recombination proteins [BR:
parz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DTQ13_00665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UPO79097
LinkDB
All DBs
Position
complement(146868..150296)
Genome browser
AA seq
1142 aa
AA seq
DB search
MSYASFVHLRNHSAYSLSQGAIRVSELVELAKKNAMPAVALTDSGNMFGGLEFSQSCRKA
GVQPIIGCQLALPSASGRPGVPAEPLVVLARTEEGLENLQYLSTQGFLNGDSADPSMPLD
VLCSRAGGLFLLTGGNRGPINRLLLGEQRAAAKQMLERLREAFGGYVAVEINRLDEAGEE
ITEPQLIALADELDLPLVATNECFFPRPELHEAHDALLCIAQGRTMAEEDRWRVSRQAWF
KTPDEMRKLFHDLPEACDNTLVIARHCAVAVNTRKPLLPVCPKVREGSTEEETLRAMAQE
GLEKRLAVMKDGENRRAEYEERLETELKIIADMGFPGYFLIVADFIQWAKAHDIPVGPGR
GSGAGSLVAYALTITDIDPIPFGLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVRNEY
GHERVAQIITFGKLQAKAAVRDVGRVLGLPYGMVNRVAELIPNNPAKPTPLAQAIEEEPR
LQEMRDTDEMIRRLLEIALQLEGLYRHASTHAAGVVIGDRDLVELVPLYRDPRSEMLVTQ
YNMKFVEQAGLVKFDFLGLTTLTILKRGVDFLRELGEEVDLSHIPLDDKKTFEMMARGDT
AGVFQFEGAGMRDMLKQMAASRLEDLIAGVSLYRPGPMENIPEYCRRKHGAPWEPPHEEI
RPILEETYGIMVYQEQVMQIAQKMAGYSLGGADLLRRAMGKKIASEMEKQRAIFCEGATK
RGIPAEKAEEVFDLMAKFANYGFNKSHAAAYAFVSYQTAWMKANHPVPFLAGCMSLAREK
TEKLAALCQEARRMGIPVLPVDINKSQADFSIERMEDGQLGIRYALAAVKRVGFVAMEGL
VQDRGEKPFCDLTDFAERCDSRHINKIQMESLAKAGAFDSLEPDRHTVFASAEIILRRAQ
SRAQEKEVGQAGLFGGGVDSSLREVLRLKKVRPWPDFERLSHEAGVIGFHMSAHPLDAYR
QVLRRLGITPALQLESRAHQGVSRVSIAGCVVDKKERPTKTGKKMAWVTLTDASGGCEVT
LFSETLQSCRDMLVAGQAVLVQAELKLDGDALRITANSVQDLETAAANEQGELRIWIDDE
AALAPLHDMLAEVRGGRGRVVLLPTLEETQAIEIRLPGFYRVTPRLAEQMHTLEGIRKLE
QA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgccagctttgttcatctccgtaatcattccgcctattccctcagccagggg
gcgattcgtgtctccgagcttgtggagctggccaaaaagaatgccatgcccgccgtcgcc
ctgacggacagcggcaacatgtttggcgggctggaattttcccagagctgccgcaaggcc
ggtgtgcagcccatcatcgggtgccagctggccctgccgtcagcttcgggcaggcccggt
gttccggcggaaccgctggtcgttctggcccggacggaagaagggctggagaatcttcag
tatctttccacgcagggcttcctgaatggggattcggcagacccgtccatgccgctggac
gtgctgtgcagccgtgccggtgggctgttcctgttgacgggtggcaaccgggggccgatc
aaccggctcctgctgggggagcagagggctgcggcgaagcagatgctcgagcgtctcagg
gaggcctttggggggtatgtggccgtcgagatcaaccggctggatgaagctggtgaggag
atcacggagccgcagctgatcgctctggccgatgagctggacctcccgcttgtggcgacc
aatgaatgtttttttcctcgaccggaactgcatgaggcgcacgatgcgctgctctgcatc
gcccaggggcgtaccatggcggaggaagaccgctggcgtgtttcccgtcaggcatggttc
aagactccggatgaaatgcggaagctcttccatgacctgccggaggcctgcgacaatacg
ctggtgatcgcccgtcactgtgccgtggcggtgaatacccgcaagccactcctgcctgtc
tgtccgaaagttcgtgaaggcagcacggaagaggaaaccctgcgggccatggcgcaggaa
gggctggagaaacgtctggctgtcatgaaggatggggagaaccgtcgggccgagtacgag
gagcggctggagaccgagctgaaaatcatagccgatatgggcttccccggttacttcctc
atcgtggcggacttcatccagtgggccaaggcgcatgacattccggtgggtccggggcgt
gggtccggtgctggatcactggtagcctatgcgctgaccatcacggatattgatcccatt
ccgttcgggctgcttttcgagcggttcctgaatcccgaacgtgtatccatgccggacttt
gatatcgatttctgtcaggaccggcgggatgaggtcatccgctacgtgcggaatgaatat
ggccacgaacgtgtggcgcagatcatcaccttcgggaaactccaggccaaggcggccgtg
cgggacgtagggcgtgtgctgggtctaccttacggtatggtcaaccgtgtggcggagttg
atccccaacaatccggccaaaccgacaccactggcccaggccattgaggaagaaccccgg
ctccaggagatgcgggacacggatgagatgatccgccgcctgctggagatcgcccttcag
ctggagggattgtaccgccacgcctcgacccatgcggccggtgtggtgatcggggaccgt
gatcttgtggagcttgtgcctctctaccgcgatccacgaagtgagatgctggtcacccag
tacaacatgaagtttgtggagcaggccgggctggtcaagttcgactttctggggctgacg
accctgaccattctcaagcggggggtcgatttcctgcgggagctgggggaagaggtggac
ctctctcatattccgctggatgacaagaaaaccttcgagatgatggcccggggagacacg
gcgggtgtgttccagttcgaaggggcgggcatgagggacatgctcaagcagatggctgcc
agccgtctggaagacctgattgccggcgtgtcgctctaccgccccggcccgatggaaaac
attcctgaatattgccgccgcaagcatggggcaccgtgggagccgcctcacgaggaaatc
cgcccgattctggaagagacctacggcatcatggtctatcaggaacaggtgatgcagatt
gcccagaagatggcgggctacagccttggcggggccgacctgctgcggcgggccatgggc
aagaagatcgcctcggagatggagaaacagcgggccattttctgcgaaggggctacgaag
aggggcatccctgccgagaaagccgaagaggtgttcgacctcatggccaaattcgccaat
tatggcttcaacaagtctcatgctgccgcttatgccttcgtgtcctatcagacggcctgg
atgaaggcgaaccatcctgttcccttcctggcaggctgcatgtctctggcacgggaaaag
acggaaaagctggcggctctctgccaggaagccagacgcatggggatccctgtcctgccg
gtggacatcaataaatcccaggccgatttttccatcgagaggatggaggacgggcagctg
ggcatccgctacgctctggcagcggtcaagcgggttggtttcgtggctatggaagggctg
gtgcaggaccgtggagaaaagccgttctgcgatctcaccgattttgccgaacggtgtgat
tcccggcacatcaacaagatacagatggagagtctggccaaggcaggtgcgttcgacagt
ctggagccagaccgtcacaccgtgtttgccagtgcggagatcatcctgcggcgggcgcag
tcccgggcgcaggagaaggaagtgggacaggccggtctgttcggtgggggtgtcgatagc
agcctgcgggaggtcctgcggttgaagaaggtccgtccctggccggattttgagcgtctc
tctcatgaggccggggtaatcgggttccatatgagtgcccatccgctggatgcttacagg
caggtgctgcgccgactggggatcacgcctgctctccagctggagagcagggcgcatcag
ggtgtatcacgtgtttccattgcgggctgtgtggtggacaagaaggagcgtcccaccaag
accggcaagaagatggcatgggtcaccctgacggatgccagcggtggctgcgaagtcacg
ttattttcggaaacattgcagagttgccgggacatgcttgtggctgggcaggctgtcctg
gtgcaggcggagctgaaattggatggagatgccctgcgcatcacggccaatagcgtgcag
gacctggaaacagccgcagccaatgagcagggagagctgcgtatctggattgatgatgag
gcagctctggccccccttcatgacatgctggcagaggtcaggggcgggcgggggcgtgtc
gtgctgttgcctactcttgaggagacgcaggcgattgagatcaggctgccgggtttctat
cgtgtcacaccccgtctggcggagcagatgcacacactggaaggaatcagaaagctggaa
caggcctga
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