Parasaccharibacter sp. TMW 2.1888: DTQ13_01040
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Entry
DTQ13_01040 CDS
T08091
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
parz
Parasaccharibacter sp. TMW 2.1888
Pathway
parz00470
D-Amino acid metabolism
parz00550
Peptidoglycan biosynthesis
parz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
parz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DTQ13_01040 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DTQ13_01040 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parz01011
]
DTQ13_01040 (murD)
Enzymes [BR:
parz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DTQ13_01040 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
parz01011
]
Precursor biosynthesis
Amino acid ligase
DTQ13_01040 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UPO79151
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Position
229429..230778
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AA seq
449 aa
AA seq
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MTVLPFPPPQKWPATLLTGQHHAVCGLGRNGAAVVQALLDMGATVQAWDDSRPKLPAPLS
SHPRLTLAPLTDLTGMDALILSPGIPHHLPRPHPAALLAREQHVPILSDAELLWQVARKA
GSRTRFVSITGTNGKSTTTALLTHILTQAGIPACCGGNFGTASLALPALGDDGVYVIEMS
SYMLERLKDYHACAAALLNLTPDHLDRHGSMQGYLDAKAHVFDNMTAGDLAILGEKASWA
DGLHQQLERQGVTVRTLSITQPVPETDAPFLPGQHNAQNIETCRAIARHLGLSEEQIAEG
IRSFTGLDHRLQLVAQADGISFINDSKATNAEASYHALKAFPKSLWIAGGMAKEGGIDSL
APLFSHVRRAFLIGQDAPLLARTLTAHDVPFEISGTLEQATRAAWDHARTHEAMPILLSP
ACASFDQFRNFEERGTAFATLARSLCGED
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcctgccctttcctcccccccagaaatggcctgcaacgctcctgaccgggcag
catcatgctgtctgcgggctgggccgcaacggtgctgccgtcgtgcaggccctgctggac
atgggagcaaccgtacaggcctgggatgacagcaggccgaagctcccagctcccctgtcc
tcacatccccgcctgacactggcgcccctgactgacctcaccggcatggatgccctgatc
ctctcgccgggcatcccgcaccatctgccccggccacaccctgctgccctgctggcacgg
gagcagcatgtgccgatcctctccgatgcagaactgctctggcaggtggctcgcaaggca
ggatcacgcacgcggttcgtctccatcacgggtacaaatggcaaatccacgaccacggcc
ctgctgacccacattctcacacaggccggcatcccggcctgctgtggcggcaattttggc
acggcctctctcgccctgcccgctctgggggatgacggcgtctatgtcattgaaatgtcg
tcctacatgctggaacggctgaaggactatcacgcctgtgccgctgccctgctcaacctg
acaccggaccatctggacaggcacggctccatgcagggctatctggatgccaaggcgcat
gtctttgacaacatgaccgcaggcgaccttgccattctgggcgaaaaggcctcctgggcg
gacggactgcaccagcagcttgagcggcagggcgtgacggtacggacactctcgatcacc
cagcctgttccagaaacagacgccccctttctgcctggacagcacaatgcccagaacata
gagacctgccgggccatcgcccgccatcttggcctctccgaggaacagattgccgagggc
atcagaagcttcaccgggctggaccatcgcctccagctcgtggcgcaggctgatggaatc
agcttcatcaacgacagcaaggccacaaatgcggaagccagctaccatgcactaaaagcc
ttccccaaaagcctctggattgccggaggcatggccaaagaaggaggaatcgacagtctg
gcaccactgttcagccatgtgcgccgtgccttcctcatcgggcaggatgccccattgctg
gccagaaccctgacagcccatgatgttcctttcgagatcagcggaacgctggagcaggca
acacgggccgcctgggaccatgcccggacacacgaggccatgcccatactcctgtccccg
gcctgtgccagttttgaccagttccgcaatttcgaggaacggggaacggcctttgccaca
ctggcccgcagcctctgcggggaggactga
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