Parasaccharibacter sp. TMW 2.1888: DTQ13_01825
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Entry
DTQ13_01825 CDS
T08091
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
parz
Parasaccharibacter sp. TMW 2.1888
Pathway
parz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DTQ13_01825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parz03019
]
DTQ13_01825
Enzymes [BR:
parz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DTQ13_01825
Messenger RNA biogenesis [BR:
parz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DTQ13_01825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
UPO80471
LinkDB
All DBs
Position
complement(393410..394582)
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AA seq
390 aa
AA seq
DB search
MARIWQALPEARLVGGCVRDLLCGRDVHDLDLASPVPPEEAQRRLEEVGARVIPTGLEHG
TITAVIDHHPYEITTLRRDVSTDGRHAVVAWTDDWEEDAQRRDFTINAMSLDQDGQLHDY
FGGLDDLRAGKVRFVGQAARRIEEDALRCLRFFRFFARYGRGEPDGEACQAIIRLRETMT
RLSVERVAMELLKILSGPQLLRTLELMEETGTLAVLLPHHAPLSGLERLLACGDPAEPLH
RLAVLYPPGGGDGQGMADVGAHLKLSNESRDMLAAFARYGPELAVTLDDDGIRRVLFQQD
RSILLLRSWLVQAQELGRPDGSWNELRHRLETVEQPVFPLAGRDLIALGVKPGPEMGRWL
KQTQHWWLTQGCRPDAGACRDWVSHQLSPS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
ctggcccgtatctggcaggccctgccggaggcccggctggtgggaggctgcgtgcgggac
ctgctctgtggtcgcgacgtgcatgatcttgacctggccagcccggttccaccggaagaa
gcccagcggcggctggaagaggtcggtgctagggtgataccgaccggccttgagcatgga
accatcacggcggtgattgaccatcacccttatgaaatcaccaccctgcggcgtgatgtc
agtaccgatggccgccatgctgtcgtcgcctggacggatgactgggaggaagatgcgcag
cggcgggacttcacgatcaacgccatgtcgctggatcaggatgggcagctgcatgattat
ttcggcggactggatgatctccgggccgggaaggtacggtttgtcgggcaggcggcacgg
cgcatcgaggaggatgccctgcggtgcctgcggtttttccgcttttttgcccgttatggc
cgtggcgaaccggatggcgaggcctgtcaggccatcatccgcttgcgggagacgatgacc
cgtctttcagtcgagcgtgtggcgatggagctgctgaaaatcctgtcaggcccgcagctt
ctgcggactctggagctgatggaggaaacgggcacccttgccgtgctgctgccgcaccat
gcgcccctgtctggtctggagcgtcttctggcctgtggtgatcctgccgagccgctgcat
cgtcttgccgttctgtatccacccggcggaggggacgggcagggcatggcggatgtcggt
gcccatctgaaactctccaatgagagccgggacatgctggccgcttttgccagatacggg
ccggaactggcggtcacgctggatgatgacggtatccggcgggttcttttccagcaggac
aggtccatcctgctgctgcgaagctggctggtgcaggcgcaggagctgggacggcctgat
gggagctggaatgagttgcggcaccggctggaaaccgtggagcagcccgttttccctctg
gcggggcgggacctgattgctctgggtgtgaaaccggggccggaaatggggcggtggctg
aaacagacgcagcactggtggctcacacagggttgccgtcccgatgccggggcatgtcgg
gactgggtgagccaccagctttccccttcctga
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