Parasaccharibacter sp. TMW 2.1888: DTQ13_05350
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Entry
DTQ13_05350 CDS
T08091
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
parz
Parasaccharibacter sp. TMW 2.1888
Brite
KEGG Orthology (KO) [BR:
parz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parz03032
]
DTQ13_05350
03400 DNA repair and recombination proteins [BR:
parz03400
]
DTQ13_05350
Enzymes [BR:
parz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DTQ13_05350
DNA replication proteins [BR:
parz03032
]
Prokaryotic type
DNA Topoisomerases
DTQ13_05350
DNA repair and recombination proteins [BR:
parz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DTQ13_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UPO79804
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Position
1169512..1172289
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AA seq
925 aa
AA seq
DB search
MRSSYLAYAMSVIVSRALPDVRDGLKPVHRRILYAMRESGFTADKPYRKSARAVGDVMGK
YHPHGDSSIYDAMVRMAQSWSMRVRLVDGQGNFGSVDGDSPAAMRYTEARLAKSASFLLD
DIDRDTVAFQPNYDESEQEPQVLPAAFPNLLVNGASGIAVGMATNIPPHNPGEVIDAVLA
LIANPDMTLEELMQIVPGPDFPTGGIIMGRRGIRQAYETGRGSIPVRARAEIEEIRKDRF
AIVVTEIPYQVNKATLQEKIADLVRSKDIEGISDIRDESDRSGMRVVIELKRDATPEVVL
NQLYRFTQLQTSFSVNMLALDEGRPRTMGLRDVLEAFIRFREDVILRRARFDLNKARDRG
HLLVGLVLAVANIDEVIALIRSAPDAATAREQLMTRTWPAADVEPLLELIHDEGNVIVDG
RVHLTEAQARGILELRLQRLTGLEREKIQAELAEVSARITELLEIIGSHVRRMEVMRDEL
QAARAALADPRCTEISDALGDQSDESLIEPGQMVVTITRDGFIKRTPLELFRSQNRGGRG
RTAAGRRGDDIVIRSFNAHTHQWVLFFSSGGKAYRMKVWHLPEAAPTAKGRALVNLLPEL
GEDTITAVLPLPQDEELWDDLHLVFATASGNVRRNRLSDFRNIRSSGLIAMKLDENDQLI
GVATCREGQDVFLATRNARAIRFQITDDVLRVFAGRGSTGVRGIRLADGDRVVSLAVLNH
VEASVEERAAYLRAANAHRRVLAAQPGDEGLEEEIEDGSELASDEEGLEEILADSPLSED
RYAELEAQEQILLTVTDTGFGRRSSAYDYRVSGRGGQGINNMTFSNARRGREVVGTLVTL
DGTDVMMVTDTGRLIRLPVEQVRVMSRQAGGVTLFRVDGDERIISVFPVMEDDADDTAEG
ETEADGADGGDTGAAPAADAGGTDD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcctcctatctggcctatgcgatgtcggtgattgtttcccgtgcgctgccagat
gtgcgtgacggcctcaagcccgtgcaccggcgtatcctgtacgccatgcgggagagtggt
ttcacggcggacaagccctaccgcaagtcggcccgtgcggtcggtgacgtgatgggtaaa
taccacccgcatggtgacagttccatttacgacgccatggtgcgcatggcgcagtcttgg
tccatgcgtgtgcggctggtggatgggcagggcaatttcgggtctgtcgatggcgacagt
ccggcggccatgcgctacaccgaggcccggctggccaaatctgcctccttcctgctggat
gacattgaccgggatacggtcgccttccagcccaactatgacgagagcgagcaggagccg
caggttcttccggctgccttcccgaatcttctggtcaatggggcgtccggcattgcggtg
ggcatggccaccaacatcccgccccacaatccgggcgaggtgatcgatgccgttctggcc
ctgatcgccaacccggacatgacgctggaagagctgatgcagatcgtcccggggccggat
ttcccgaccggcgggatcatcatgggccgtcggggcatccggcaggcctatgagacgggc
cgtggctccatccctgtccgtgcccgtgccgagatcgaggagatccgcaaggaccgcttc
gccatcgtggtgacggagattccatatcaggtcaacaaggccacgctgcaggagaagatt
gccgatctcgtccgctccaaggacattgagggcatttccgacatccgggatgaaagtgac
cgttccggcatgcgggtggtgatcgagctgaagcgtgacgccacgccggaagtggtgctg
aaccagctttaccgtttcacccagcttcagacgagcttcagcgtcaacatgctggcactg
gatgaaggccgcccccgcaccatggggctgcgggacgtgctggaggccttcatccgcttc
cgtgaggatgtgattctccgccgtgcccgtttcgacctgaataaggcgagggatcggggg
catctgctggtcggtctggtgctggccgtggccaacattgacgaggtgatcgccctcatc
cgttccgccccggatgccgctacggcccgtgagcagctcatgacacgcacatggcctgcc
gccgacgtggagccgctgctggagctgatccatgatgaaggcaatgtgatcgttgatggc
cgtgtccatctgacagaagcgcaggcccgtgggattctggagctgcgcctccagcgtctg
accggtctggagcgtgagaagattcaggcggagctggcagaggtcagtgcccgcatcacg
gagcttctggagatcattggcagccatgtgcgccgcatggaggtcatgcgggacgagctt
caggccgcccgtgctgctctggctgacccacgctgcacggaaatctccgatgcgctgggt
gaccagtccgatgagagcctgatcgagccgggacagatggtggtgaccatcacacgggac
ggtttcatcaagcggacgccgctggagctgttccgttcgcagaaccgtggtggccgtggc
cgcacggcagcggggcggcgaggcgatgacatcgtcatccgcagcttcaatgcccatacc
caccagtgggtgctgttcttctcctcgggcgggaaggcctaccgcatgaaggtctggcac
ctgccggaggcggccccgacggccaaggggcgggcactggtcaacctgctgccggagctg
ggcgaggataccatcacggccgttctgccgctgccgcaggatgaggagctgtgggatgac
ctgcatctcgtctttgccacggcgagcgggaacgtgcggcgcaaccgcctgagcgacttc
cgcaacatccgttcttccggtctgatcgccatgaagctggatgagaatgaccagctgatc
ggcgtggcaacatgccgggaggggcaggacgtgttcctcgccacccgtaatgcccgggcc
atccgcttccagatcacggatgacgtgctgcgtgttttcgctggccgtggcagcaccggt
gtgcggggcatccgccttgctgatggtgaccgggtcgtttccctagccgtgctgaaccat
gtcgaggccagcgtggaggagcgggctgcttacctccgggctgccaatgcccatcgccgt
gttctggcggcccagcccggggatgagggtctggaggaagagatcgaggatggcagcgag
ctggcttccgatgaggaagggcttgaggagattctggctgacagcccgctgagcgaagac
cgttatgccgagcttgaggcgcaggagcagatcctgctcaccgtgacggacacgggcttc
gggcggcggtcctctgcctatgactatcgtgtctccggccgtggcgggcagggcatcaac
aacatgaccttctccaacgcccgccgtgggcgtgaggtcgtgggtacgctcgtgacgctg
gatggcacggacgtgatgatggtgacggatacgggccgtctcatccgtctgccggtcgag
caggtgcgtgtgatgtcccgtcaggcagggggtgtgacgctcttccgtgtggatggtgac
gagcgcatcatcagcgtcttccccgtgatggaagatgatgcggacgataccgccgagggt
gagaccgaggctgatggggcggacggtggagacaccggagctgccccggcggctgatgcc
ggtgggacggatgactga
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