KEGG   Parasaccharibacter sp. TMW 2.1888: DTQ13_06265
Entry
DTQ13_06265       CDS       T08091                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
parz  Parasaccharibacter sp. TMW 2.1888
Brite
KEGG Orthology (KO) [BR:parz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:parz03032]
    DTQ13_06265
   03036 Chromosome and associated proteins [BR:parz03036]
    DTQ13_06265
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:parz02048]
    DTQ13_06265
Enzymes [BR:parz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DTQ13_06265
DNA replication proteins [BR:parz03032]
 Prokaryotic type
  DNA Topoisomerases
   DTQ13_06265
Chromosome and associated proteins [BR:parz03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    DTQ13_06265
Prokaryotic defense system [BR:parz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    DTQ13_06265
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: UPO79941
LinkDB
Position
complement(1361278..1363275)
AA seq 665 aa
MADMFEQGSTPAPSHVQPAEQYDAGAIEVLEGLEPVRRRPGMYIGGTDDAAYHHLASEII
DNAMDEAVAGHATTIEVCLEDAHTLMVRDNGRGIPTDPHPRFPKKSALEVIFTTLHAGGK
FSGKSYATSGGLHGVGSSVVNALASHLEVEVYRNRKGWRQTFSRGLPTSTLESTKPAIRR
GTMVRFTPDSDIFGPLHFSPARLYRQCQIKAALFRGVSITWSCAPELLKGDNAPPAEAVI
AYPNGLEDALTADLGPSPALLTPLWAGEAELPVAADGQPGGRVEWAVAFLDQGNSALISY
CNTIPTPQGGTHENGLRAALVKGFRNWGDQRKIRRSSTITAEDVLGTINARLSVFIRNPQ
FQGQTKDRLTTQEASRLVEGALRDRIDHWLGGNPQQADSLVGYMVERAEERLRRREARET
TRKTATKRLRLPGKLTDCSRSNAHETEIFLVEGESAGGSARQARDRETQAVLPLRGKILN
VASATQEKLLANTELKDLIEALGCGFGKTLDLEKLRYGRIIIMTDADVDGAHIASLLMTF
FFREMPELVRQGHLYLAQPPLYRLTHGSKTVYAMNDLDRDRRLKTDFKPNAKVEISRFKG
LGEMPVSDLKETTMSPARRTLLRVTVPTEDNLMTRRRIESLMGRKPELRFQFIQEQAQSV
NLLDI
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggccgatatgttcgagcagggttccacacctgccccctcccatgtacagccagctgaa
cagtatgatgccggggccattgaggtccttgaaggactggagcccgtacgccgtcgccct
ggcatgtatatcgggggtacggacgatgcggcctaccaccatcttgcttccgaaatcatt
gacaacgccatggatgaagccgtggcgggtcatgccacgaccatcgaggtctgtctggaa
gacgcccacaccctgatggtccgtgacaatggccgtgggattccgactgacccccatccc
cgcttcccgaaaaaatcagcccttgaggtcattttcaccacgctccatgcgggggggaaa
ttctctggcaaatcctatgccacatcaggcggtctgcatggtgtgggcagctctgtcgtc
aacgcactggcctcccatctggaagtcgaggtctaccgcaaccgcaagggatggcgacag
actttctcccgtggtctgccaaccagtacgctagaaagcacaaaacctgccatccggcgt
ggcacgatggtgcgtttcaccccggacagtgacattttcggccccctgcatttctccccg
gcccgcctgtaccgccagtgccagatcaaggcagcgctgttccggggggtcagcatcaca
tggtcctgtgccccggaacttctgaaaggggacaatgctccaccagccgaagctgtcatc
gcctatccaaatggtctggaagatgccctgacggctgatcttggtccctcacctgccctg
cttacccccctctgggctggtgaggctgagctgcctgtggctgccgatggccaacccggt
gggcgtgtcgagtgggctgttgcctttctcgaccagggaaacagcgctctcatttcctac
tgcaacaccatccccacaccacagggtggcacccatgagaacggcctgcgagcggcactc
gtcaaaggcttccgcaactggggggaccagcgcaagattcgccgttccagcaccatcacg
gcggaagatgtgctgggcaccatcaatgcccgtctgtccgtcttcatccgcaacccacaa
ttccagggacagacaaaagacaggctgaccacacaggaggccagtcgcctcgtggaaggt
gccctgcgggaccggatcgaccactggctggggggcaatccccaacaggctgacagtctg
gtcggctatatggtcgaacgggcagaagaacgcctgcgccgccgtgaagcccgtgaaaca
acccgcaaaacggcgacaaaacgcctgcgtctgcccggcaagctgacagactgctcccgc
agcaatgcccatgagacggagatctttctcgtggaaggcgaatcagccggggggtctgcc
cgtcaggcccgtgacagagaaacacaggccgttctgcccctgcggggcaagatactcaat
gtcgcctctgccacacaggaaaaactgctggccaatacggagctgaaagacctgatcgag
gcacttggctgtggctttggcaagactctcgaccttgaaaaactgcgctatggccgcatc
atcatcatgacagatgctgacgtggatggcgcccatatcgcctccctgctgatgaccttc
ttcttccgggagatgccggagctcgtccgacaggggcacctctacctggcgcaaccacca
ctctaccggctcactcatggcagcaagaccgtctacgccatgaacgatctcgaccgtgac
cgcaggttgaagacggacttcaagcccaatgccaaagttgaaatttcacgcttcaaaggg
ctgggggaaatgccggtttccgacctcaaggaaaccaccatgtcccctgcacgccgcaca
ctcctgcgtgtaaccgtcccgacagaagacaacctgatgacccgcagacggatcgagagc
ctcatgggccgcaagcctgagctgcgcttccagttcattcaggagcaggcccagtcggtc
aatcttctcgatatctga

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