Parasaccharibacter sp. TMW 2.1888: DTQ13_06450
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Entry
DTQ13_06450 CDS
T08091
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
parz
Parasaccharibacter sp. TMW 2.1888
Brite
KEGG Orthology (KO) [BR:
parz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
parz03016
]
DTQ13_06450
Enzymes [BR:
parz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DTQ13_06450
Transfer RNA biogenesis [BR:
parz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DTQ13_06450
Prokaryotic type
DTQ13_06450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UPO79967
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All DBs
Position
1404867..1405841
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AA seq
324 aa
AA seq
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MARKRGRDIHGWLILDKPLGPSSTTMVNRLLRFFDGRKAGHGGTLDPLASGVLPIAFGKA
TSTIPYIMDATKRYRFTLSFGESRTTDDREGDVLATSDVRPSDEDIRAVLPSLCGDVMQV
PPVFSALRVGGQRAYDLARAGRPPELPPRPARIDSITLVDRPDADTAVFDVQSGKGVYMR
SLARDIALACGTVGHISVLRRTKCGPFDLSHACSAEQLGLDKTDETRDKACVLPVPLLEA
ATALVDIPALAVTKAEGKSLICGQAVTLAHLEGGVPDGVETVPLWRVMIGEHVIGLCRVA
EGRLRAVRMLENHLFFGEQDVDYS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagagaggtagggacatccatggctggctgattctggacaagccattgggg
ccgagttccacaacgatggtcaaccggctgctgcgtttttttgatggacgcaaggccggc
cacggcgggactctggatcctctggcgtcaggtgttctgccgatcgcctttggtaaggca
accagcaccattccgtacatcatggatgcaaccaaacggtatcggtttaccctctctttt
ggtgaaagccggacgacggatgaccgggagggtgatgttcttgcaacgtccgatgtccgg
ccatcggatgaagatatcagggctgtattgccttcgctttgcggggatgtgatgcaggtg
cctccagttttttcggctcttcgtgtcggtgggcagcgggcttacgatctggcccgggcg
gggcgtccgccggaacttcccccccgtcctgctcgaatcgattcgattactctcgtggac
cgccccgatgccgatacggccgtttttgacgtccagtcaggcaagggggtttatatgcgg
tcgcttgcgcgggatattgctctggcctgtggtactgtggggcatatctctgttctgcgg
cgcacaaaatgcgggccgtttgatctttcccatgcttgttcagcagaacagttagggctg
gacaaaacggacgaaactagagacaaggcatgtgttcttccggttcctctgctggaggcg
gcgaccgcgctggtcgacatcccggcgctggccgtcacgaaagcggaaggaaaatccctg
atctgtgggcaggctgtcacgctggcccatcttgaggggggcgtgcctgatggggtggag
actgttccactctggcgggtcatgatcggggagcatgtcatcgggctgtgccgggttgcc
gaagggcggttgcgggcagtcagaatgttggaaaatcatttgttttttggagaacaggat
gtcgattacagctga
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