Parasaccharibacter sp. TMW 2.1888: DTQ13_07635
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Entry
DTQ13_07635 CDS
T08091
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
parz
Parasaccharibacter sp. TMW 2.1888
Brite
KEGG Orthology (KO) [BR:
parz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
parz03016
]
DTQ13_07635
Enzymes [BR:
parz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DTQ13_07635
Transfer RNA biogenesis [BR:
parz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DTQ13_07635
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Corona_NS4
Motif
Other DBs
NCBI-ProteinID:
UPO80158
LinkDB
All DBs
Position
complement(1686312..1686962)
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AA seq
216 aa
AA seq
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MSTPRNAIHLYEGDLPDNLELGSSIAIDTETMGLNPHRDRLCLVQISAGDGQAHLVQFVP
EHLGGRGYGHCPNLKALLQDSSVTKLMHFARFDVAVLQHYLGITLNSVICTKIAARLVYT
FTDRHGLAYLSRELLGVEMSKQQQSSDWGSPTLTEEQRQYAASDVLHLHALWEKLEAMLI
REGRRDLAQSCYDFLPARAKLDLLGYDVSDIFAHRA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagcactccgcgtaacgccattcatctatatgagggcgacctcccggacaatcttgag
ctaggctcttccatcgccattgataccgagaccatggggctcaacccccaccgggaccgc
ctctgcctcgtgcagatttccgccggggatggtcaggcgcatctcgtacagttcgtgccg
gaacatctgggcgggcgtggctacgggcactgccccaacctcaaggcgctccttcaggac
agttctgtcaccaagctgatgcattttgcccggttcgacgtggccgttctccagcattat
ctcggcatcacgctgaattccgtcatctgcacgaagattgccgcccgtcttgtctatacc
ttcacggacaggcatggccttgcctatctcagccgggagctgctgggcgtcgagatgtcc
aaacagcagcagagctccgactggggcagcccgaccctgacagaagagcagcgccagtat
gcagcctccgatgtgctgcatctccatgccctttgggaaaagctggaagccatgctcatc
cgggaagggcggcgtgatcttgcgcagagctgctatgatttcctccctgcccgtgcaaag
ctggatcttctgggctatgatgtgtcggacattttcgcccatcgtgcctga
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