Parasaccharibacter sp. TMW 2.1888: DTQ13_07675
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Entry
DTQ13_07675 CDS
T08091
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
parz
Parasaccharibacter sp. TMW 2.1888
Pathway
parz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
parz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DTQ13_07675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parz03400
]
DTQ13_07675
DNA repair and recombination proteins [BR:
parz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DTQ13_07675
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DTQ13_07675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
AAA_22
UB2H
Ish1
AAA_16
Kinesin
Microtub_bd
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
UPO80163
LinkDB
All DBs
Position
1697410..1699527
Genome browser
AA seq
705 aa
AA seq
DB search
MAVSSSSRKKKKPVAPRQTDFFPEKQPAKPKTNRFVVKSDYEPSGDQPQAIAALLDGLQA
GERDQVLMGVTGSGKTFTMAKVIEAAQRPTLIMAPNKTLAAQLYSEMKQFFPDNAVEYFV
SYYDYYQPEAYVPRSDTFIEKDSQRNERIDRMRHAATQALLERNDVIIVASVSCIYGIGS
PESYARMKIRLVPGEIIDRDDLIRHLVELQYQRNDLAFERGSFRVRGEQVDIFPIQNEDR
AWRVMLFGDEVESITEFDPLTGEKTADLEEVSLYASSHYVTPRPTLNQAMVSIKDELQDR
IQYFRDKGKPLEEERILQRTNFDLEMLETTGVCKGIENYSRYLSGRRPGDPPPTLFEYLP
EDALLIVDESHVGVPQIGGMERGDRARKETLADFGFRLPSCLDNRPLSFSEWDAFRPQSI
FVSATPGPWEMEQTEGVFAEQIIRPTGLTDPITIIRPVEGQVDDLLHEARATIAENGRVL
VTTLTKRMAEDLTEYLSEHGVKVRYLHSDIDTLERMEIIRDLRLGAFDVLVGINLLREGL
DIPECALVAILDADKEGFLRSRTSLVQTIGRAARNVNGRVLLYADKETDSLRYAIEETAR
RREKQMAWNEAHGITPQTVRSRISDTLFQEELAGKEAPPESDPQLTIDDLRKKMREAAAE
LDFEQAAALRDEIHRREASDIGLIAPAPAASQARQRKTTRRKKKD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttcttcgtcgtcccgcaaaaagaaaaaaccggtcgcgccccgtcagacggat
tttttccctgaaaaacagcccgccaaaccgaagaccaaccggtttgtcgtcaaatcggat
tacgaaccctccggggaccagccgcaggcgattgccgccctgctggacgggttgcaggcc
ggggagcgggatcaggtgctgatgggtgtgacagggtcgggcaagaccttcaccatggcc
aaggtgatcgaggcggcgcagcggcccacgctcatcatggctcccaacaagaccctggcg
gcccagctctatagtgagatgaaacagttcttccccgacaatgcggtggaatatttcgtt
tcctactatgattactatcagccggaagcctatgtgccccgttcggataccttcatcgag
aaggacagccagcgcaacgagcgcatagaccggatgcgccatgctgccacgcaggccctg
ctggaaaggaacgatgtcatcatcgtggcctccgtgtcctgcatttatggtatcggctcg
cccgaatcctatgcccgcatgaaaatccgcctcgtgccgggggagatcatcgatcgggac
gacctgatccgccatctggtggagctgcaataccagcggaatgatctggccttcgagcgt
gggtcattccgggtgcggggggagcaggtggacattttccccatccagaacgaggacagg
gcgtggcgtgtcatgctcttcggggatgaggtggaaagcatcaccgaattcgacccgctg
acgggggagaagacggctgatctggaagaggtcagcctctatgccagctcccattatgtg
acgccccgcccaacgctcaatcaggcgatggtcagcatcaaggatgaactgcaggaccgc
atccagtatttcagggacaagggaaagccgctggaggaagaacgcatccttcaacggacc
aattttgatctggaaatgctggaaacgacaggcgtctgcaagggaattgagaactactcc
cgctatctttcaggtcgccgtcccggtgatccgccgccaaccctctttgagtatctgccg
gaagatgccctgttgatcgtggatgaaagccatgtcggcgtgccccagattggcgggatg
gaacggggggaccgtgcccgcaaggaaacgctggcagatttcgggttccgtcttccctcc
tgtctggataaccggcccctgtctttttcggagtgggatgccttccggccgcagagcatc
ttcgtgtccgccacgccggggccgtgggagatggaacagacggaaggcgtgtttgccgag
cagatcatccgtccgaccggcctgacagaccccatcaccatcatccgacccgtggaaggg
caggtggacgacctgctgcatgaggccagggcaaccattgccgagaatggccgtgtcctc
gtcacgaccctgaccaagcgcatggctgaggacctgacggaatatctttccgaacatggc
gtgaaggtgcggtatctccattccgacattgatacgctggagcgcatggagatcatccgg
gacctgcggctgggggcctttgatgttcttgtgggcatcaacctgctgcgggaggggctg
gacattcccgaatgtgcccttgtggcgattctcgatgcagacaaggaaggcttcctgcgg
tcccgcacctctcttgtgcagacgatcggccgagccgctcgcaacgtgaatggccgtgtc
ctgctctatgcggacaaggagacggacagcctgcgttacgccatcgaggaaacggcccgc
cgccgggaaaagcagatggcctggaacgaggcgcacggcatcacgccgcagacggtccgc
agccgcatcagcgacacgctctttcaggaagagctggcgggcaaggaagctccgccggag
tctgatccacagctcaccattgacgatctgcgcaagaaaatgcgtgaagcagcagctgag
ctggactttgaacaggccgccgccctgcgggacgagattcaccggcgggaggccagcgac
attggcctcattgctccggccccggcagcttcgcaggccagacaacgcaagacgaccaga
cggaaaaagaaggactga
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