Parasaccharibacter sp. TMW 2.1888: DTQ13_08000
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Entry
DTQ13_08000 CDS
T08091
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
parz
Parasaccharibacter sp. TMW 2.1888
Pathway
parz00300
Lysine biosynthesis
parz00470
D-Amino acid metabolism
parz01100
Metabolic pathways
parz01110
Biosynthesis of secondary metabolites
parz01120
Microbial metabolism in diverse environments
parz01230
Biosynthesis of amino acids
Module
parz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
parz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DTQ13_08000 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DTQ13_08000 (lysA)
Enzymes [BR:
parz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DTQ13_08000 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
UPO80215
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Position
complement(1777089..1778411)
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AA seq
440 aa
AA seq
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MTSTHPDPTFQTLLNNHPNLSYKGRQGLVMDGTSLTDIAREHGTPCWVISADTLRQRAHA
LQDAFRARNLPIHCHFAVKAQDHQACLTVLAQCGFGADVVSGGELRRALAAGIRARDIVF
SGIGKTDDELELAIHHQIGQINVESVEELHRLNALAQNMQQRARIAFRVNPDIDAQTHSK
ITTGRAEDKFGIAHDAIPALYRKAQTDMHGVELVGLAVHLGSQMVTAAPFRKGYERIAAL
VRTLREDGLHVSDIDCGGGLGIAYRNEQAPPPAMLADVIAETLGDLDVQLHVEPGRWLAA
PAGVLLARVIDVKDAARRFVIIDAGMNDLVRPAMYDSWHGILPLNEPDTTTEECVDVVGP
ICESSDIFARQRSLPPLKKGDLVALLDAGAYGTVMSSTYNSRPLAAQVMIEGGRKAIIHR
RQTLEELLAQEAVPDWLARP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgacacatcccgacccgacattccagaccctcctgaacaaccaccccaacctg
tcctacaaaggcagacaggggctggtcatggatggcacctctctcacggatattgccaga
gagcacggaacaccctgctgggtcatcagcgccgatacgctacgccagcgtgcccatgcc
cttcaggatgcattcagggcccgcaatctgcccatccattgccactttgccgtcaaggca
caggatcatcaggcctgcctgaccgttctggcacaatgtggcttcggggctgatgtcgtc
agcggtggagaactgcgtcgggctcttgcggcgggcatcagggcccgtgacatcgtcttc
tcaggaatcggcaagacggatgacgagctggagctggcgattcatcatcagatcggtcag
atcaatgtcgaaagtgtggaagaactgcaccggctcaacgctctggcacaaaacatgcag
cagcgggcccgcatcgccttccgggtcaatcccgatattgacgcccagacacacagcaag
atcacgacagggcgtgccgaagacaaattcggcattgcccatgacgccatcccggccctc
taccggaaggcacagacagacatgcacggtgtggagctggtcggtcttgccgttcatctc
ggcagccagatggtgacggcagctcccttccgcaaaggctatgagcgaattgccgcactc
gtccgcaccctgcgggaagatgggctgcatgtcagcgacattgactgcggcggcggcctt
ggtatcgcctaccggaacgagcaggcacctccccccgccatgctggctgatgtcattgcc
gagacgctgggagacctggatgtgcagctgcatgtcgagcccggccgctggctggcggca
cccgccggggttcttctggcccgtgtgatcgacgtgaaggacgctgcccgccgtttcgtc
atcattgatgctggcatgaatgacctcgtccgcccagccatgtatgattcctggcatggc
atcctccccctgaacgaaccggacaccaccaccgaagagtgcgtagatgtggtcggtccc
atctgtgagagcagcgacatctttgcccgccagcgttccctgccccctttgaagaaagga
gatctggttgctctgctggatgccggagcctatggcacagtcatgagctccacctacaat
tcacgcccccttgctgcgcaggtcatgattgaaggcggccggaaagccatcatccacaga
cgccagacacttgaagagctgctggcacaggaagccgtccccgactggctggcccgcccc
tga
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