Parasaccharibacter sp. TMW 2.1888: DTQ13_08230
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Entry
DTQ13_08230 CDS
T08091
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
parz
Parasaccharibacter sp. TMW 2.1888
Pathway
parz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
parz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DTQ13_08230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parz03400
]
DTQ13_08230
Enzymes [BR:
parz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DTQ13_08230
DNA repair and recombination proteins [BR:
parz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DTQ13_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UPO80252
LinkDB
All DBs
Position
complement(1829108..1829902)
Genome browser
AA seq
264 aa
AA seq
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MRLITWNINSLRLRLPLLQRLIEEQAPDVICLQETKVPDPLYPRDALAELGFPHQLYRGM
KSYNGVTILSRTPLEPITGTPDWCGREDCRHVAASIQTETGPVTLHNFYVPAGGDIPDPQ
ENEKFAHKLAFLEEATAWFRANPPQRSILVGDLNIAPLEHDVWSHRQLLKIVSHTPPETT
RLTEWLHAGFEDAMRKAIPEPEKLFTWWSYRNRDWKKSNRGRRLDHIWTTPDLLPGLKTI
NVLSPMRDWTSPSDHVPVMMDLAV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcattacatggaacatcaattcactccgcctccggctacccctgctccagcgt
ctgattgaggaacaggcccctgatgtcatctgccttcaggaaaccaaagtgccggaccct
ctctacccccgtgatgcactggcagagctgggttttccccatcagctctatcgtggaatg
aagagctataatggggtcaccattctctcccgcacaccgctggagcccattaccggcacg
ccggactggtgtggccgggaggattgccgccatgtggctgccagcatccagacagaaacc
gggccggtgacgctccacaatttctacgtgcccgccggtggcgatattcccgacccgcag
gaaaatgaaaaattcgcccataaactcgccttccttgaggaggctacagcatggttccgg
gccaatccgccacagcggagcattctggtcggtgatctcaacatcgctccgctggagcat
gatgtctggagccaccgtcagcttctgaaaatcgtcagccatacgccaccggaaacgaca
cgcctgaccgaatggcttcatgccggatttgaagacgccatgcggaaggccattccagaa
ccggaaaagctcttcacatggtggtcataccgcaatcgtgactggaaaaaatccaaccgg
gggcgccgtctggaccatatctggacaacaccggaccttctccccggcctgaagacaatc
aatgtcctcagccccatgcgggactggacctccccttccgaccacgttcccgtcatgatg
gatctggccgtctga
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