Pyrobaculum arsenaticum: Pars_0122
Help
Entry
Pars_0122 CDS
T00503
Name
(GenBank) Radical SAM domain protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
pas
Pyrobaculum arsenaticum
Brite
KEGG Orthology (KO) [BR:
pas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pas03016
]
Pars_0122
Enzymes [BR:
pas01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
Pars_0122
Transfer RNA biogenesis [BR:
pas03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
Pars_0122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
Motif
Other DBs
NCBI-ProteinID:
ABP49737
UniProt:
A4WH70
LinkDB
All DBs
Position
complement(109276..110727)
Genome browser
AA seq
483 aa
AA seq
DB search
MERPLRFVRMASGVHVVALMTQPLPCPGRCAFCPTSADAPKSYMPDSPVVLRAKRNRYDP
YLQTAGRVKVYLENGHTPSKIEAVVMGGTFSALPRSYREWFVANVYKALNDYPHWAPAAD
PAPDLEAEQLRNETASLRLVALAVETRPDYVDGAEADFLLRLGVTRMELGVQSIYDDVLQ
RVKRGHGVAEVARATALLKDSAYKVCYHLMPGLPGSDPDRDLEMVKEVFSDPRFVPDCVK
IYPTYVVPGTELYDEWRRGAYRSYDEETWLELLAKIYASVPRWARVMRLGRDIPLHHVVD
GPRWGNMRQMVLRHMERLGLKCLEIRCREVGIKLANNVPIQPGPIEVKKTEYEASGGVEI
FLEAVGPDDTLYAILRLRIPGKPHRPELRKAALVRELHVYGPAVPVGEQGIWWQHTGLGR
GLMTRAEEIAREYGVLKIAVISGVGAREYYRKLGYSRCGPYMCKPIGALLGYADDYLAAS
ESI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcccctccgctttgtcagaatggcgagcggagtccacgtcgttgccctcatg
acacagcccttaccctgccccggccggtgcgccttctgcccgacctcggccgacgccccc
aagtcctacatgccggacagccccgtggtgctccgcgccaaaaggaataggtacgatccg
tacttacagacggcgggccgggtaaaggtgtatctcgaaaacggccacacgccctctaag
atagaggctgttgtgatgggcggcaccttcagcgcgttgccgcggagctaccgggagtgg
ttcgtcgccaacgtgtacaaggcgcttaacgactacccccactgggccccagccgccgac
cctgcccccgatcttgaggccgaacagctgaggaacgagacagcgtccctccggctggtg
gctctcgccgtggagaccaggccggactacgtggacggggccgaggcggacttcctcctt
aggctcggcgtcaccaggatggagctcggcgttcagtccatatacgacgacgttttgcag
agggttaagaggggccacggcgtggccgaagtggccagagccaccgcgcttctgaaagac
tcggcgtataaggtgtgctaccacctcatgcctgggctcccggggagcgacccagaccgc
gacttggagatggtgaaggaggtgttttcagacccccgcttcgtgccggactgcgtcaag
atataccccacctacgtggtgccggggactgagctctacgatgagtggcgccgcggtgct
tataggagctacgacgaggagacttggctggagctgttggcgaagatatacgcgtcagtc
ccccgctgggccagggtgatgaggcttggcagggacatccccctccaccacgtcgtggac
ggccccaggtggggcaacatgcggcagatggtgctgaggcacatggagaggctgggccta
aagtgcctggagattaggtgcagagaggtgggcataaagctggcaaacaacgtgccgatc
cagccgggccccatcgaggttaagaagacggagtacgaggcctcagggggcgtggagata
tttctagaagccgtcggcccagacgacaccctatacgcaattctgcggctgaggatcccc
ggcaagccgcataggcctgagctacgcaaggcggcgcttgtgagggagctccacgtctac
ggccccgccgtacccgtgggggagcagggcatttggtggcaacacacaggcctcggcaga
ggcttgatgacccgcgccgaggagatcgccagggagtacggcgtgttgaaaatcgcggtt
atctccggggtcggggcgagggagtactaccgcaagctgggctacagcagatgcggcccc
tacatgtgcaagcccataggcgcgctgctcggctacgcagacgactacctcgccgcaagc
gaaagtatttaa
DBGET
integrated database retrieval system
