Pyrobaculum arsenaticum: Pars_0862
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Entry
Pars_0862 CDS
T00503
Name
(GenBank) phosphoesterase, DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pas
Pyrobaculum arsenaticum
Pathway
pas03410
Base excision repair
pas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pars_0862
03430 Mismatch repair
Pars_0862
03440 Homologous recombination
Pars_0862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pas03400
]
Pars_0862
DNA repair and recombination proteins [BR:
pas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Pars_0862
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pars_0862
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Pars_0862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABP50447
UniProt:
A4WJ80
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All DBs
Position
765041..766006
Genome browser
AA seq
321 aa
AA seq
DB search
MGRRLTILAHGDADGVCSAALVKAALRDQYSEIQVVFTHPVDLVKDFQQYARGDVYIVDV
AIDEKAAQEVQKLFRAYGGRVVYIDHHPLSADLAGAEVIHEEGPSASELTYRKLGGLLPP
SYSRVALYGAISDYMDYTEWVKSALEKWDKRIVYFEAGVLMQGLERARKDHDFKRAVVDH
LAENRTPSSMERLMKLAEEQAGINEALVGWVERYVAKRGGVAFVVNPPGPLGLAANLARG
LTDSPVGIAAEERGDIYVMSLRSVQVDLNQFLRDFARRYSVSGGGHKNAAGARIPKRLFD
VFVEELSSYISRLRWGPAFSQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggcggttgacaatactggcacacggcgacgcagacggggtctgctcggcggca
ctagtgaaggcggcgctaagagatcagtacagcgaaattcaggtggtattcacccaccct
gtggatctggtcaaggacttccagcaatacgcaaggggagacgtctacatagtagacgtg
gcgatagatgagaaggcggcccaggaggtgcaaaaactatttagagcctacggcggcagg
gtcgtgtacatcgaccaccaccccctgtcagctgatttggccggagctgaggtgatccac
gaagagggcccctccgcctcggagctcacctataggaagctaggcggcttgttgcctcct
tcttatagccgggttgcgctgtacggcgccattagcgactacatggactacacagagtgg
gtcaagtcggcgctggaaaagtgggacaagcgtattgtatacttcgaggccggggtccta
atgcagggcctagagcgggcgcgcaaagaccacgacttcaagcgggcggtggtggaccac
ctagccgagaacaggacgccctcctccatggagaggctcatgaagctggcggaggagcaa
gcggggataaacgaggccctggtgggctgggttgagagatacgtggctaagagaggcggc
gtcgccttcgtcgtcaatccaccaggccccctcggcctcgcggccaacttagcgaggggt
ctcacagactcgcccgtgggaatagcggcggaggagcggggtgacatatacgtgatgagc
ctccgctctgtccaagtggacctaaaccagtttctaagggattttgcccggcgctattcc
gtatctggcggcggccacaaaaacgccgcgggggcgcgcatcccgaagcgccttttcgac
gtcttcgtagaggagctcagctcgtatatatcacggctgagatggggccctgctttctct
caatag
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